RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 AFAP1L2Q8N4X5 818 aa26.14■■□□□ 1.78
ATPAF1-201ENST00000329231 TMEM79Q9BSE2 394 aa26.14■■□□□ 1.78
ATPAF1-201ENST00000329231 LHPPQ9H008 270 aa26.14■■□□□ 1.78
ATPAF1-201ENST00000329231 CDC42EP4Q9H3Q1 356 aaKnown RBP26.14■■□□□ 1.78
ATPAF1-201ENST00000329231 ALG9Q9H6U8 611 aa26.14■■□□□ 1.78
ATPAF1-201ENST00000329231 DNAJC11Q9NVH1 559 aa26.14■■□□□ 1.78
ATPAF1-201ENST00000329231 NUP210LQ5VU65 1888 aa26.14■■□□□ 1.78
ATPAF1-201ENST00000329231 A0A087X1B8 175 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 NSG1A0A0A6YYJ2 146 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 A0A1W2PQ72 361 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 URADA6NGE7 173 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 TTLL8A6PVC2 850 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 STK16O75716 305 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 CYC1P08574 325 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 RHOXF2BP0C7M4 288 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 ALOX12P18054 663 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 TFEBP19484 476 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 VARSP26640 1264 aaKnown RBP26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 XCR1P46094 333 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 FAAH2Q6GMR7 532 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 JMJD6Q6NYC1 403 aaPredicted RBP26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 IGFL3Q6UXB1 125 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 SLCO4C1Q6ZQN7 724 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 ABHD13Q7L211 337 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 ISCA2Q86U28 154 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 RBMXL3Q8N7X1 1067 aaKnown RBP26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 ANKRD53Q8N9V6 530 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 LRRN4CLQ8ND94 238 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 METTL21AQ8WXB1 218 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 RHOXF2Q9BQY4 288 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 MESP1Q9BRJ9 268 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 FUT8Q9BYC5 575 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 CLMPQ9H6B4 373 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 ZNF160Q9HCG1 818 aa26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 PTBP2Q9UKA9 531 aaKnown RBP26.13■■□□□ 1.77
ATPAF1-201ENST00000329231 RDH16O75452 317 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 ACSL3O95573 720 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 COX6A1P12074 109 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 GMPRP36959 345 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 HSPA7P48741 367 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 FOXK1P85037 733 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 DLG1Q12959 904 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 BMPR2Q13873 1038 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 MINDY4Q4G0A6 757 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 MFSD4BQ5TF39 518 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 AGAP7PQ5VUJ5 663 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 KRT78Q8N1N4 520 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 TTLQ8NG68 377 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 EXT2Q93063 718 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 PNPLA2Q96AD5 504 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 THOC3Q96J01 351 aaKnown RBP26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 AGAP4Q96P64 663 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 MFRPQ9BY79 579 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 PITHD1Q9GZP4 211 aaPredicted RBP26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 VN1R1Q9GZP7 353 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 IGSF5Q9NSI5 407 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 NUDT4Q9NZJ9 180 aa26.12■■□□□ 1.77
ATPAF1-201ENST00000329231 LOC102723996A0A087X1L8 192 aa26.11■■□□□ 1.77
ATPAF1-201ENST00000329231 CLGNO14967 610 aa26.11■■□□□ 1.77
ATPAF1-201ENST00000329231 GALR3O60755 368 aaPredicted RBP26.11■■□□□ 1.77
ATPAF1-201ENST00000329231 KERAO60938 352 aa26.11■■□□□ 1.77
ATPAF1-201ENST00000329231 JRKO75564 520 aa26.11■■□□□ 1.77
ATPAF1-201ENST00000329231 C8orf89P0DMQ9 161 aa26.11■■□□□ 1.77
ATPAF1-201ENST00000329231 IL10P22301 178 aa26.11■■□□□ 1.77
ATPAF1-201ENST00000329231 KCNC1P48547 511 aa26.11■■□□□ 1.77
ATPAF1-201ENST00000329231 MLLT10P55197 1068 aa26.11■■□□□ 1.77
ATPAF1-201ENST00000329231 EEF1A2Q05639 463 aaKnown RBP26.11■■□□□ 1.77
ATPAF1-201ENST00000329231 DEFB134Q4QY38 66 aa26.11■■□□□ 1.77
ATPAF1-201ENST00000329231 TMEM205Q6UW68 189 aa26.11■■□□□ 1.77
ATPAF1-201ENST00000329231 SNX31Q8N9S9 440 aa26.11■■□□□ 1.77
ATPAF1-201ENST00000329231 SLC6A16Q9GZN6 736 aa26.11■■□□□ 1.77
ATPAF1-201ENST00000329231 EHD1Q9H4M9 534 aa26.11■■□□□ 1.77
ATPAF1-201ENST00000329231 SLAMF7Q9NQ25 335 aa26.11■■□□□ 1.77
ATPAF1-201ENST00000329231 SNX15Q9NRS6 342 aa26.11■■□□□ 1.77
ATPAF1-201ENST00000329231 RIC8BQ9NVN3 520 aa26.11■■□□□ 1.77
ATPAF1-201ENST00000329231 IGHV1-45A0A0A0MS14 117 aa26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 HMX2A2RU54 273 aa26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 SORBS2O94875 1100 aaKnown RBP26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 C2P06681 752 aa26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 SERPINA6P08185 405 aa26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 ZNF888P0CJ79 500 aaPredicted RBP26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 GSTM2P28161 218 aa26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 Q0VFX4 171 aa26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 SLBPQ14493 270 aaKnown RBP eCLIP26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 IGFBP7Q16270 282 aa26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 PDK4Q16654 411 aa26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 FAM83EQ2M2I3 478 aa26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 FBXO48Q5FWF7 155 aa26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 UBAP2Q5T6F2 1119 aaKnown RBP26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 SLC6A19Q695T7 634 aa26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 TMIGD1Q6UXZ0 262 aa26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 KBTBD2Q8IY47 623 aa26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 ZADH2Q8N4Q0 377 aa26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 ESAMQ96AP7 390 aa26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 NXNL1Q96CM4 212 aa26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 OR1F2PQ96R84 312 aa26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 NFU1Q9UMS0 254 aa26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 IKBKGQ9Y6K9 419 aa26.1■■□□□ 1.77
ATPAF1-201ENST00000329231 CCDC189A1A4V9 331 aa26.09■■□□□ 1.77
ATPAF1-201ENST00000329231 ZNF860A6NHJ4 632 aa26.09■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms