RNA–Protein interactions for RNA: ENST00000323668.11

TCOF1-201, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCOF1, Length 4,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-201ENST00000323668 RNF130Q86XS8 419 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 PGBD3Q8N328 593 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 FAM129BQ96TA1 746 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 TNFRSF12AQ9NP84 129 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 IGFBP6P24592 240 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-201ENST00000323668 VIPR1P32241 457 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 PREPP48147 710 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 VN1R5Q7Z5H4 357 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 GPR149Q86SP6 731 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 CLECL1Q8IZS7 167 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 PAPD5Q8NDF8 572 aaKnown RBP14.24□□□□□ -0.13
TCOF1-201ENST00000323668 APIPQ96GX9 242 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 MIR1-1HGQ9H1L0 117 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 RHCGQ9UBD6 479 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 DLGAP4Q9Y2H0 992 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 SESN1Q9Y6P5 492 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 PMF1-BGLAPU3KQ54 211 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.24□□□□□ -0.13
TCOF1-201ENST00000323668 GPR39O43194 453 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 CACNG3O60359 315 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 SOX14O95416 240 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 MPC1LP0DKB6 136 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 HSD3B1P14060 373 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 GJA1P17302 382 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 HSD3B2P26439 372 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 CBLBQ13191 982 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 DOC2AQ14183 400 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 ATP13A5Q4VNC0 1218 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 METTL2BQ6P1Q9 378 aaKnown RBP14.24□□□□□ -0.13
TCOF1-201ENST00000323668 MACC1Q6ZN28 852 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 NATD1Q8N6N6 113 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 GRPEL2Q8TAA5 225 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 FATE1Q969F0 183 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 TEX37Q96LM6 180 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 CITED4Q96RK1 184 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 SPATA9Q9BWV2 254 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 KELP23276 732 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 CCT3P49368 545 aaKnown RBP14.24□□□□□ -0.13
TCOF1-201ENST00000323668 BLVRAP53004 296 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 CRISP3P54108 245 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 KEAP1Q14145 624 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 SLC14A2Q15849 920 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 REEP3Q6NUK4 255 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 SRFBP1Q8NEF9 429 aaKnown RBP14.24□□□□□ -0.13
TCOF1-201ENST00000323668 OR2T11Q8NH01 316 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 AUTS2Q8WXX7 1259 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 PDLIM5Q96HC4 596 aaKnown RBP14.24□□□□□ -0.13
TCOF1-201ENST00000323668 MS4A4AQ96JQ5 239 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 NTMT1Q9BV86 223 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 ASPNQ9BXN1 380 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 TAS2R7Q9NYW3 318 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 GPRC5BQ9NZH0 403 aa14.24□□□□□ -0.13
TCOF1-201ENST00000323668 FAM86C2PA6NEL3 165 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 SLITRK5O94991 958 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 PHC1P78364 1004 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 NOGQ13253 232 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 C6orf183Q5T699 404 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 FAM46CQ5VWP2 391 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 PIGXQ8TBF5 258 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 ZFP90Q8TF47 636 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 CNDP2Q96KP4 475 aaKnown RBP14.23□□□□□ -0.13
TCOF1-201ENST00000323668 RTP3Q9BQQ7 232 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 MND1Q9BWT6 205 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 C1QTNF7Q9BXJ2 289 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 IL1RAPQ9NPH3 570 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 CROCCQ5TZA2 2017 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 C2orf78A6NCI8 922 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 TLX2O43763 284 aaPredicted RBP14.23□□□□□ -0.13
TCOF1-201ENST00000323668 ADH1CP00326 375 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 SLC6A4P31645 630 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 SPCS2Q15005 226 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 CYP27C1Q4G0S4 372 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 CCBE1Q6UXH8 406 aaPredicted RBP14.23□□□□□ -0.13
TCOF1-201ENST00000323668 NDNFQ8TB73 568 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 FCRL4Q96PJ5 515 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 DNAJC27Q9NZQ0 273 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 DEC1Q9P2X7 70 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 MALT1Q9UDY8 824 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 LAMP1P11279 417 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 HOXD8P13378 290 aaPredicted RBP14.23□□□□□ -0.13
TCOF1-201ENST00000323668 PRAMEF14Q5SWL7 426 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 MANEALQ5VSG8 457 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 PRAMEF13Q5VWM6 474 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 TMIGD1Q6UXZ0 262 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 ZNF367Q7RTV3 350 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 ZNF548Q8NEK5 533 aaPredicted RBP14.23□□□□□ -0.13
TCOF1-201ENST00000323668 TRIB2Q92519 343 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 SLITRK2Q9H156 845 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 MARCH7Q9H992 704 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 SEC14L4Q9UDX3 406 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 GTF2A1LQ9UNN4 478 aa14.23□□□□□ -0.13
TCOF1-201ENST00000323668 TNFRSF10BO14763 440 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 SSNA1O43805 119 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 ORC5O43913 435 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 RFPL2O75678 378 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 CD40LGP29965 261 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 TIA1P31483 386 aaKnown RBP eCLIP14.22□□□□□ -0.132e-7■□□□□ 8.2
TCOF1-201ENST00000323668 POLR2IP36954 125 aaKnown RBP14.22□□□□□ -0.13
TCOF1-201ENST00000323668 CXCR4P61073 352 aa14.22□□□□□ -0.13
TCOF1-201ENST00000323668 CAP1Q01518 475 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms