RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 SIAEQ9HAT2 523 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 PRDM6Q9NQX0 595 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 ZSCAN32Q9NX65 697 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 TAS2R7Q9NYW3 318 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 NPAP1Q9NZP6 1156 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 SEPT3Q9UH03 358 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 HCFC2Q9Y5Z7 792 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 KIAA0100Q14667 2235 aaKnown RBP7.5□□□□□ -1.21
CNOT4-201ENST00000315544 A0A0G2JK05 382 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 A0A1B0GTQ1 180 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 SAC3D1A6NKF1 404 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 M0QZ92 97 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 TEX28O15482 410 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 ADORA3P0DMS8 318 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 OR1E1P30953 314 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 ETFBP38117 255 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 ATXN3P54252 364 aaPredicted RBP7.5□□□□□ -1.21
CNOT4-201ENST00000315544 DSG2Q14126 1118 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 PCSK7Q16549 785 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 CYP51A1Q16850 503 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 VMACQ2NL98 169 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 GPR33Q49SQ1 333 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 MRNIPQ6NTE8 343 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 TRIM74Q86UV6 250 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 TRIM73Q86UV7 250 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 KIF18BQ86Y91 864 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 MINDY2Q8NBR6 621 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 SUN3Q8TAQ9 357 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 RSPRY1Q96DX4 576 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 PDXPQ96GD0 296 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 C1orf50Q9BV19 199 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 TRIM15Q9C019 465 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 RNF167Q9H6Y7 350 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 TLR8Q9NR97 1041 aaKnown RBP7.5□□□□□ -1.21
CNOT4-201ENST00000315544 A4GNTQ9UNA3 340 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 THADAQ6YHU6 1953 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 SYCE1LA8MT33 242 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 FPGTO14772 594 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 UPK1BO75841 260 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 MYO1DO94832 1006 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 MT-ND1P03886 318 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 PPP3CCP48454 512 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 KPNA2P52292 529 aaKnown RBP7.5□□□□□ -1.21
CNOT4-201ENST00000315544 KPNA1P52294 538 aaPredicted RBP7.5□□□□□ -1.21
CNOT4-201ENST00000315544 ABRQ12979 859 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 RGNQ15493 299 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 NFE2Q16621 373 aaPredicted RBP7.5□□□□□ -1.21
CNOT4-201ENST00000315544 ZNF628Q5EBL2 1059 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 DEPDC1Q5TB30 811 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 STEAP3Q658P3 488 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 MRM1Q6IN84 353 aaKnown RBP7.5□□□□□ -1.21
CNOT4-201ENST00000315544 GDPD3Q7L5L3 318 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 SERPINA9Q86WD7 417 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 LIX1Q8N485 282 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 OR56A4Q8NGH8 313 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 ZNF461Q8TAF7 563 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 CREB3L4Q8TEY5 395 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 EFHD2Q96C19 240 aaPredicted RBP7.5□□□□□ -1.21
CNOT4-201ENST00000315544 KCTD14Q9BQ13 255 aaPredicted RBP7.5□□□□□ -1.21
CNOT4-201ENST00000315544 IPPKQ9H8X2 491 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 IL21RQ9HBE5 538 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 GKN1Q9NS71 199 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 C1orf109Q9NX04 203 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 KLHL3Q9UH77 587 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 ZNF451Q9Y4E5 1061 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 CLDN16Q9Y5I7 305 aa7.5□□□□□ -1.21
CNOT4-201ENST00000315544 ARHGEF33A8MVX0 844 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 G3V2T6 193 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 IGLV3-19P01714 112 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 PRKACGP22612 351 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 DDX6P26196 483 aaKnown RBP eCLIP7.49□□□□□ -1.21
CNOT4-201ENST00000315544 SPINT3P49223 89 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 AP1S1P61966 158 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 LMAN2Q12907 356 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 PLCL1Q15111 1095 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 AP5B1Q2VPB7 878 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 FAM174BQ3ZCQ3 159 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 PLEKHS1Q5SXH7 462 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 LIPJQ5W064 366 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 KLHL17Q6TDP4 642 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 SERPINA13PQ6UXR4 307 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 OXR1Q8N573 874 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 BTN2A2Q8WVV5 523 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 NTNG2Q96CW9 530 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 CXorf40BQ96DE9 158 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 UBL7Q96S82 380 aaPredicted RBP7.49□□□□□ -1.21
CNOT4-201ENST00000315544 HAUS8Q9BT25 410 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 TAAR2Q9P1P5 351 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 DKK3Q9UBP4 350 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 PCDH7O60245 1069 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 CBFA2T3O75081 653 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 FGF19O95750 216 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 FOSL2P15408 326 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 PSMA4P25789 261 aaKnown RBP7.49□□□□□ -1.21
CNOT4-201ENST00000315544 KIAA1161Q6NSJ0 714 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 TUBA3EQ6PEY2 450 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 PRSS55Q6UWB4 352 aaPredicted RBP7.49□□□□□ -1.21
CNOT4-201ENST00000315544 DHRSXQ8N5I4 330 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 OR10A6Q8NH74 314 aa7.49□□□□□ -1.21
CNOT4-201ENST00000315544 HSD17B8Q92506 261 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms