RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 ADAMTS4O75173 837 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 LRATO95237 230 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 IGHA2P01877 340 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 POU2F1P14859 743 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 AQP1P29972 269 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 S100A3P33764 101 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 IL2P60568 153 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 MRPS6P82932 125 aaKnown RBP17.41■□□□□ 0.38
SPSB4-201ENST00000310546 MAB21L1Q13394 359 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 MFSD13AQ14CX5 517 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 GLYR1Q49A26 553 aaPredicted RBP17.41■□□□□ 0.38
SPSB4-201ENST00000310546 MARVELD3Q96A59 401 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 C1orf74Q96LT6 269 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 TM9SF2Q99805 663 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 KATNAL1Q9BW62 490 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 GABARAPL3Q9BY60 117 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 SERHLQ9NQF3 203 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 RLIMQ9NVW2 624 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 PADI3Q9ULW8 664 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 CFAP20Q9Y6A4 193 aaKnown RBP17.41■□□□□ 0.38
SPSB4-201ENST00000310546 FGF10O15520 208 aaPredicted RBP17.41■□□□□ 0.38
SPSB4-201ENST00000310546 HAPLN1P10915 354 aaPredicted RBP17.41■□□□□ 0.38
SPSB4-201ENST00000310546 CKMT1AP12532 417 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 KDELR2P33947 212 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 GNPDA1P46926 289 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 DBPQ10586 325 aaPredicted RBP17.41■□□□□ 0.38
SPSB4-201ENST00000310546 POU4F3Q15319 338 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 PCBP1Q15365 356 aaKnown RBP eCLIP17.41■□□□□ 0.38
SPSB4-201ENST00000310546 MLIPQ5VWP3 458 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 ANKS3Q6ZW76 656 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 EIF3MQ7L2H7 374 aaKnown RBP17.41■□□□□ 0.38
SPSB4-201ENST00000310546 PLPP6Q8IY26 295 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 DNAJA4Q8WW22 397 aaPredicted RBP17.41■□□□□ 0.38
SPSB4-201ENST00000310546 METTL2AQ96IZ6 378 aaKnown RBP17.41■□□□□ 0.38
SPSB4-201ENST00000310546 SENP8Q96LD8 212 aa17.41■□□□□ 0.38
SPSB4-201ENST00000310546 C2orf49Q9BVC5 232 aaPredicted RBP17.41■□□□□ 0.38
SPSB4-201ENST00000310546 PTGESO14684 152 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 WNT9AO14904 365 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 TSPAN12O95859 305 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 ALDH1A1P00352 501 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 BHLHA9Q7RTU4 235 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 ATP6V1C2Q8NEY4 427 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 GPR150Q8NGU9 434 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 HMCESQ96FZ2 354 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 CDKN2AIPNLQ96HQ2 116 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 TSSK3Q96PN8 268 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 DCLRE1CQ96SD1 692 aaKnown RBP17.4■□□□□ 0.38
SPSB4-201ENST00000310546 RPS6KA6Q9UK32 745 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 Q9Y3F1 56 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 CCL27Q9Y4X3 112 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 FAM240BA0A1B0GVZ2 78 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 RFXANKO14593 260 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 PEX11BO96011 259 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 CHRM5P08912 532 aaPredicted RBP17.4■□□□□ 0.38
SPSB4-201ENST00000310546 PNPLA4P41247 253 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 GDF5P43026 501 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 ITGA1P56199 1179 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 EIF4HQ15056 248 aaKnown RBP17.4■□□□□ 0.38
SPSB4-201ENST00000310546 USP39Q53GS9 565 aaKnown RBP17.4■□□□□ 0.38
SPSB4-201ENST00000310546 SLC5A8Q8N695 610 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 LHFPL5Q8TAF8 219 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 PSMG2Q969U7 264 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 KCNN2Q9H2S1 579 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 GALNT9Q9HCQ5 603 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 MALT1Q9UDY8 824 aa17.4■□□□□ 0.38
SPSB4-201ENST00000310546 MYL12BO14950 172 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 SERPINI2O75830 405 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 AP2A2O94973 939 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 MYL12AP19105 171 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 WARSP23381 471 aaKnown RBP17.39■□□□□ 0.37
SPSB4-201ENST00000310546 PSMA1P25786 263 aaKnown RBP17.39■□□□□ 0.37
SPSB4-201ENST00000310546 MAP2K3P46734 347 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 HSPA7P48741 367 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 DGKEP52429 567 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 ATN1P54259 1190 aaPredicted RBP17.39■□□□□ 0.37
SPSB4-201ENST00000310546 LARS2Q15031 903 aaKnown RBP17.39■□□□□ 0.37
SPSB4-201ENST00000310546 WSCD2Q2TBF2 565 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 SLC39A12Q504Y0 691 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 OR4F3Q6IEY1 312 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 C19orf48Q6RUI8 117 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 PHC2Q8IXK0 858 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 C19orf18Q8NEA5 215 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 PHF21AQ96BD5 680 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 MTERF3Q96E29 417 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 KCNH6Q9H252 994 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 LRTM1Q9HBL6 345 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 HHATLQ9HCP6 504 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 GPRC5BQ9NZH0 403 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 NDRG2Q9UN36 371 aaKnown RBP17.39■□□□□ 0.37
SPSB4-201ENST00000310546 IQCF5A8MTL0 148 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 CDRT1O95170 752 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 OTCP00480 354 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 BCKDHAP12694 445 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 OGNP20774 298 aaKnown RBP17.39■□□□□ 0.37
SPSB4-201ENST00000310546 MAN2A2P49641 1150 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 MLLT6P55198 1093 aaPredicted RBP17.39■□□□□ 0.37
SPSB4-201ENST00000310546 CTAG1AP78358 180 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 RGS1Q08116 209 aa17.39■□□□□ 0.37
SPSB4-201ENST00000310546 CCDC85BQ15834 202 aaPredicted RBP17.39■□□□□ 0.37
SPSB4-201ENST00000310546 OPALINQ96PE5 141 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms