RNA–Protein interactions for RNA: ENST00000284767.9

PDLIM3-201, Transcript of PDZ and LIM domain 3, humanhuman

TSL 5 BASIC

Gene PDLIM3, Length 2,589 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-201ENST00000284767 CLK3P49761 638 aaKnown RBP17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 NCS1P62166 190 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 TRIM46Q7Z4K8 759 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 GALNT5Q7Z7M9 940 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 DSG4Q86SJ6 1040 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 ZDHHC21Q8IVQ6 265 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 RAVER1Q8IY67 606 aaKnown RBP17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 OR8D1Q8WZ84 308 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 LGALS12Q96DT0 336 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 DACH2Q96NX9 599 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 MYADMQ96S97 322 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 TMEM245Q9H330 911 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 PARVBQ9HBI1 364 aa17.66■□□□□ 0.42
PDLIM3-201ENST00000284767 A0A096LPI6 279 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 EPB42P16452 691 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 ITPKAP23677 461 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 TMEM115Q12893 351 aaPredicted RBP17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 CPSF6Q16630 551 aaKnown RBP eCLIP17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 GTDC1Q4AE62 458 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 CCSMST1Q4G0I0 132 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 KDM4DQ6B0I6 523 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 CES5AQ6NT32 575 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 CCDC81Q6ZN84 652 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 PLD3Q8IV08 490 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 ZNF540Q8NDQ6 660 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 SLC12A9Q9BXP2 914 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 KCNH6Q9H252 994 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 SLC28A3Q9HAS3 691 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 LRTM1Q9HBL6 345 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 VNN3Q9NY84 501 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 GDE1Q9NZC3 331 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 SAMD4AQ9UPU9 718 aaKnown RBP17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 MAN2B2Q9Y2E5 1009 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 GMPPBQ9Y5P6 360 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 MUC22E2RYF6 1773 aaPredicted RBP17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 EDDM13A0A1B0GTR0 161 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 EPHX1P07099 455 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 EIF2DP41214 584 aaKnown RBP17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 SOX9P48436 509 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 VASPP50552 380 aaPredicted RBP17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 HYAL1Q12794 435 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 RUNX3Q13761 415 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 DGCR6Q14129 220 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 SIM2Q14190 667 aaPredicted RBP17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 PTCHD3Q3KNS1 767 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 NEK5Q6P3R8 708 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 TUBA3EQ6PEY2 450 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 PAGE2Q7Z2X7 111 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 TMEM132CQ8N3T6 1108 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 KRTCAP2Q8N6L1 136 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 IPCEF1Q8WWN9 437 aaPredicted RBP17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 FGF14Q92915 247 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 ITCHQ96J02 903 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 TM9SF3Q9HD45 589 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 ERVK-11Q9UQG0 969 aa17.65■□□□□ 0.42
PDLIM3-201ENST00000284767 ULK1O75385 1050 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 OXSR1O95747 527 aaPredicted RBP17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 FADS2O95864 444 aaKnown RBP17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 ADRB3P13945 408 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 PDHA2P29803 388 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 ABHD18Q0P651 414 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 SELENBP1Q13228 472 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 ELAVL3Q14576 367 aaKnown RBP17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 PARM1Q6UWI2 310 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 KIAA1958Q8N8K9 716 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 UBTD2Q8WUN7 234 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 DTD2Q96FN9 168 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 COQ10AQ96MF6 247 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 ZNF229Q9UJW7 825 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 SLC22A14Q9Y267 594 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 SEC22BO75396 215 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 UPK1BO75841 260 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 CCNDBP1O95273 360 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 C6P13671 934 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 ITGB7P26010 798 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 GSSP48637 474 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 DAPP51397 102 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 NEK2P51955 445 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 TUBA1BP68363 451 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 USP39Q53GS9 565 aaKnown RBP17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 LAIR1Q6GTX8 287 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 OR2T5Q6IEZ7 315 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 TMEM220Q6QAJ8 160 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 TUBA1AQ71U36 451 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 TSPYL5Q86VY4 417 aaPredicted RBP17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 OR2T29Q8NH02 315 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 CTRCQ99895 268 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 GULP1Q9UBP9 304 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 TRPS1Q9UHF7 1281 aa17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 NDRG4Q9ULP0 352 aaKnown RBP17.64■□□□□ 0.41
PDLIM3-201ENST00000284767 SAGE2PA6NJ88 616 aa17.63■□□□□ 0.41
PDLIM3-201ENST00000284767 PRAMEF4O60810 478 aa17.63■□□□□ 0.41
PDLIM3-201ENST00000284767 FAM20BO75063 409 aa17.63■□□□□ 0.41
PDLIM3-201ENST00000284767 GSNP06396 782 aa17.63■□□□□ 0.41
PDLIM3-201ENST00000284767 HIST1H2AGP0C0S8 130 aaPredicted RBP17.63■□□□□ 0.41
PDLIM3-201ENST00000284767 HIST1H2ADP20671 130 aa17.63■□□□□ 0.41
PDLIM3-201ENST00000284767 PCYT1AP49585 367 aa17.63■□□□□ 0.41
PDLIM3-201ENST00000284767 DLX2Q07687 328 aaPredicted RBP17.63■□□□□ 0.41
PDLIM3-201ENST00000284767 MAD2L1BPQ15013 274 aaPredicted RBP17.63■□□□□ 0.41
PDLIM3-201ENST00000284767 MAPK11Q15759 364 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms