RNA–Protein interactions for RNA: ENST00000246868.6

SBDS-201, Transcript of SBDS, ribosome maturation factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SBDS, Length 1,631 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDS-201ENST00000246868 GSTA3Q16772 222 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 RFTN2Q52LD8 501 aaPredicted RBP18.34■□□□□ 0.53
SBDS-201ENST00000246868 TMEM35AQ53FP2 167 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 DEPDC1Q5TB30 811 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 PRSS42Q7Z5A4 293 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 KMT5CQ86Y97 462 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 CAMKVQ8NCB2 501 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 MARK4Q96L34 752 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 FCRL4Q96PJ5 515 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 CDC6Q99741 560 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 C1orf50Q9BV19 199 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 NLNQ9BYT8 704 aa18.34■□□□□ 0.53
SBDS-201ENST00000246868 RUVBL1Q9Y265 456 aaKnown RBP18.34■□□□□ 0.53
SBDS-201ENST00000246868 A0A1W2PQM1 296 aa18.33■□□□□ 0.52
SBDS-201ENST00000246868 PRAMEF10O60809 474 aa18.33■□□□□ 0.52
SBDS-201ENST00000246868 ALDOCP09972 364 aaKnown RBP18.33■□□□□ 0.52
SBDS-201ENST00000246868 PCSK2P16519 638 aa18.33■□□□□ 0.52
SBDS-201ENST00000246868 HSD11B2P80365 405 aa18.33■□□□□ 0.52
SBDS-201ENST00000246868 TGM3Q08188 693 aa18.33■□□□□ 0.52
SBDS-201ENST00000246868 SQLEQ14534 574 aa18.33■□□□□ 0.52
SBDS-201ENST00000246868 IL23RQ5VWK5 629 aa18.33■□□□□ 0.52
SBDS-201ENST00000246868 CLNKQ7Z7G1 428 aa18.33■□□□□ 0.52
SBDS-201ENST00000246868 SRFBP1Q8NEF9 429 aaKnown RBP18.33■□□□□ 0.52
SBDS-201ENST00000246868 OR4D9Q8NGE8 314 aa18.33■□□□□ 0.52
SBDS-201ENST00000246868 APIPQ96GX9 242 aa18.33■□□□□ 0.52
SBDS-201ENST00000246868 GFM1Q96RP9 751 aaKnown RBP18.33■□□□□ 0.52
SBDS-201ENST00000246868 MRPL1Q9BYD6 325 aaKnown RBP18.33■□□□□ 0.52
SBDS-201ENST00000246868 REXO4Q9GZR2 422 aaKnown RBP18.33■□□□□ 0.52
SBDS-201ENST00000246868 MYLK2Q9H1R3 596 aa18.33■□□□□ 0.52
SBDS-201ENST00000246868 ATXN7L1Q9ULK2 861 aaPredicted RBP18.33■□□□□ 0.52
SBDS-201ENST00000246868 POLR3HQ9Y535 204 aaPredicted RBP18.33■□□□□ 0.52
SBDS-201ENST00000246868 URADA6NGE7 173 aa18.32■□□□□ 0.52
SBDS-201ENST00000246868 CCT8L1PA6NM43 557 aa18.32■□□□□ 0.52
SBDS-201ENST00000246868 PROB1E7EW31 1015 aa18.32■□□□□ 0.52
SBDS-201ENST00000246868 ACPPP15309 386 aa18.32■□□□□ 0.52
SBDS-201ENST00000246868 TGM1P22735 817 aa18.32■□□□□ 0.52
SBDS-201ENST00000246868 ATP4BP51164 291 aa18.32■□□□□ 0.52
SBDS-201ENST00000246868 VN1R4Q7Z5H5 301 aa18.32■□□□□ 0.52
SBDS-201ENST00000246868 FAM9CQ8IZT9 166 aa18.32■□□□□ 0.52
SBDS-201ENST00000246868 CPSF7Q8N684 471 aaKnown RBP18.32■□□□□ 0.52
SBDS-201ENST00000246868 FITM2Q8N6M3 262 aa18.32■□□□□ 0.52
SBDS-201ENST00000246868 C1orf52Q8N6N3 182 aaKnown RBP18.32■□□□□ 0.52
SBDS-201ENST00000246868 WDR48Q8TAF3 677 aa18.32■□□□□ 0.52
SBDS-201ENST00000246868 CHTF18Q8WVB6 975 aa18.32■□□□□ 0.52
SBDS-201ENST00000246868 N4BP2L2Q92802 583 aaPredicted RBP18.32■□□□□ 0.52
SBDS-201ENST00000246868 RGMAQ96B86 450 aa18.32■□□□□ 0.52
SBDS-201ENST00000246868 F2RL3Q96RI0 385 aa18.32■□□□□ 0.52
SBDS-201ENST00000246868 FAM60AQ9NP50 221 aa18.32■□□□□ 0.52
SBDS-201ENST00000246868 AIG1Q9NVV5 245 aa18.32■□□□□ 0.52
SBDS-201ENST00000246868 ASIC5Q9NY37 505 aa18.32■□□□□ 0.52
SBDS-201ENST00000246868 TMEM9Q9P0T7 183 aa18.32■□□□□ 0.52
SBDS-201ENST00000246868 SEMA5BQ9P283 1151 aa18.32■□□□□ 0.52
SBDS-201ENST00000246868 COPG1Q9Y678 874 aaKnown RBP18.32■□□□□ 0.52
SBDS-201ENST00000246868 CAPN7Q9Y6W3 813 aa18.32■□□□□ 0.52
SBDS-201ENST00000246868 LRIT2A6NDA9 550 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 H0YGG7 62 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 SAP18O00422 153 aaKnown RBP18.31■□□□□ 0.52
SBDS-201ENST00000246868 TXNDC9O14530 226 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 SLC22A2O15244 555 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 SRPX2O60687 465 aaPredicted RBP18.31■□□□□ 0.52
SBDS-201ENST00000246868 EIF2S1P05198 315 aaKnown RBP18.31■□□□□ 0.52
SBDS-201ENST00000246868 ADSLP30566 484 aaPredicted RBP18.31■□□□□ 0.52
SBDS-201ENST00000246868 SEPHS1P49903 392 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 DIO3P55073 304 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 ARF3P61204 181 aaPredicted RBP18.31■□□□□ 0.52
SBDS-201ENST00000246868 TBL3Q12788 808 aaKnown RBP18.31■□□□□ 0.52
SBDS-201ENST00000246868 UBAP2LQ14157 1087 aaKnown RBP18.31■□□□□ 0.52
SBDS-201ENST00000246868 KIAA0040Q15053 153 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 MANEAQ5SRI9 462 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 TMTC4Q5T4D3 741 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 FRMPD2BQ6IN97 320 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 PAGE2Q7Z2X7 111 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 MCATQ8IVS2 390 aaKnown RBP18.31■□□□□ 0.52
SBDS-201ENST00000246868 MIER2Q8N344 545 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 METTL4Q8N3J2 472 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 DNAJC22Q8N4W6 341 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 NT5CQ8TCD5 201 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 QRFPRQ96P65 431 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 ARMCX1Q9P291 453 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 PLCL2Q9UPR0 1127 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 LOC105369274A0A096LPK9 316 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 LOC102723532A0A0G2JNH3 316 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 A8MU76 341 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 ZSCAN9O15535 394 aaPredicted RBP18.31■□□□□ 0.52
SBDS-201ENST00000246868 TBX6O95947 436 aaPredicted RBP18.31■□□□□ 0.52
SBDS-201ENST00000246868 STATHP02808 62 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 PRPS2P11908 318 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 HNRNPH1P31943 449 aaKnown RBP18.31■□□□□ 0.52
SBDS-201ENST00000246868 VSX2P58304 361 aaPredicted RBP18.31■□□□□ 0.52
SBDS-201ENST00000246868 SPIDRQ14159 915 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 ADPRMQ3LIE5 342 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 TOR1AIP1Q5JTV8 583 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 NOXRED1Q6NXP6 359 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 TRIM40Q6P9F5 258 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 COMMD6Q7Z4G1 85 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 OR4N4Q8N0Y3 316 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 CSNK1A1LQ8N752 337 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 TM4SF19Q96DZ7 209 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 SLC6A16Q9GZN6 736 aa18.31■□□□□ 0.52
SBDS-201ENST00000246868 SIRT5Q9NXA8 310 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms