RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 MMP28Q9H239 520 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 ZBTB20Q9HC78 741 aaPredicted RBP13.38□□□□□ -0.27
HCFC2-201ENST00000229330 TTC24A2A3L6 582 aaPredicted RBP13.38□□□□□ -0.27
HCFC2-201ENST00000229330 URADA6NGE7 173 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 MITFO75030 526 aaPredicted RBP13.38□□□□□ -0.27
HCFC2-201ENST00000229330 ZNF630Q2M218 657 aaPredicted RBP13.38□□□□□ -0.27
HCFC2-201ENST00000229330 POM121L1PQ3SYA9 428 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 ULK3Q6PHR2 472 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 QSOX2Q6ZRP7 698 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 UBQLNLQ8IYU4 475 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 RTP4Q96DX8 246 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 ZBED6CLQ96FA7 236 aaPredicted RBP13.38□□□□□ -0.27
HCFC2-201ENST00000229330 SLC30A3Q99726 388 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 MYOCQ99972 504 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 NDC1Q9BTX1 674 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 RSPH9Q9H1X1 276 aaPredicted RBP13.38□□□□□ -0.27
HCFC2-201ENST00000229330 CHMP1AQ9HD42 196 aaPredicted RBP13.38□□□□□ -0.27
HCFC2-201ENST00000229330 THG1LQ9NWX6 298 aaKnown RBP13.38□□□□□ -0.27
HCFC2-201ENST00000229330 KCTD3Q9Y597 815 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 ARFGEF2Q9Y6D5 1785 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 TEX46H3BTG2 121 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 FUCA1P04066 466 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 ZNF252P-AS1Q0IIN9 211 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 ATAT1Q5SQI0 421 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 KANK2Q63ZY3 851 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 RHOXF1Q8NHV9 184 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 KCTD13Q8WZ19 329 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 DNASE1L2Q92874 299 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 ACDQ96AP0 544 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 PYCR2Q96C36 320 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 ACTR6Q9GZN1 396 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 NENFQ9UMX5 172 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 MYH2Q9UKX2 1941 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 DGKGP49619 791 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 C1QTNF8P60827 252 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 PRR5P85299 388 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 FGFBP1Q14512 234 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 RD3Q7Z3Z2 195 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 SNX20Q7Z614 316 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 C7orf57Q8NEG2 295 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 OR6C4Q8NGE1 309 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 RHEBL1Q8TAI7 183 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 CMTM7Q96FZ5 175 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 IFT46Q9NQC8 304 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 GPR83Q9NYM4 423 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 RNF11Q9Y3C5 154 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 PCDHGB7Q9Y5F8 929 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 DNAJC15Q9Y5T4 150 aa13.38□□□□□ -0.27
HCFC2-201ENST00000229330 ZFP37Q9Y6Q3 630 aaPredicted RBP13.38□□□□□ -0.27
HCFC2-201ENST00000229330 MATN4O95460 622 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 H2AFB2P0C5Z0 115 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 CAPN3P20807 821 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 OXTRP30559 389 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 CASP3P42574 277 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 VMACQ2NL98 169 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 GALNT11Q8NCW6 608 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 TAS2R10Q9NYW0 307 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 POU2F3Q9UKI9 436 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 RGPD2P0DJD1 1756 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 A0A1W2PRQ8 180 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 M0R036 132 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 ACSL4O60488 711 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 DUSP11O75319 330 aaKnown RBP13.37□□□□□ -0.27
HCFC2-201ENST00000229330 OR4Q2P0C623 313 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 SLC35G4P0C7Q5 338 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 SMIM18P0DKX4 95 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 EPCAMP16422 314 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 RPL35P42766 123 aaKnown RBP13.37□□□□□ -0.27
HCFC2-201ENST00000229330 GDF5P43026 501 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 AP1S1P61966 158 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 CBX2Q14781 532 aaPredicted RBP13.37□□□□□ -0.27
HCFC2-201ENST00000229330 C2orf73Q8N5S3 287 aaPredicted RBP13.37□□□□□ -0.27
HCFC2-201ENST00000229330 C1orf52Q8N6N3 182 aaKnown RBP13.37□□□□□ -0.27
HCFC2-201ENST00000229330 IL37Q9NZH6 218 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 MEIOCA2RUB1 952 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 DNASE1L1P49184 302 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 PRPF38BQ5VTL8 546 aaKnown RBP13.37□□□□□ -0.27
HCFC2-201ENST00000229330 SLC25A25Q6KCM7 469 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 SLC30A6Q6NXT4 461 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 HFE2Q6ZVN8 426 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 CXorf40AQ8TE69 158 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 MROQ9BYG7 248 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 PCDHGA4Q9Y5G9 962 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 MYH3P11055 1940 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 OR2AG2A6NM03 316 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 SLC25A12O75746 678 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 KDELR2P33947 212 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 SPIN4Q56A73 249 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 NPAS3Q8IXF0 933 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 ZNF354BQ96LW1 612 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 RHCGQ9UBD6 479 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 MEMO1Q9Y316 297 aa13.37□□□□□ -0.27
HCFC2-201ENST00000229330 A0A1W2PQ67 120 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 TMEM88BA6NKF7 163 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 TLL1O43897 1013 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 ALPPP05187 535 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 BCHEP06276 602 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 CRHBPP24387 322 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 ALDH3B2P48448 385 aa13.36□□□□□ -0.27
HCFC2-201ENST00000229330 INCA1Q0VD86 236 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms