RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Pop7Q9DCH2 140 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Slc19a2Q9EQN9 498 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Aif1lQ9EQX4 150 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gipc2Q9Z2H7 314 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ccdc120A2AEV7 629 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ndor1A2AI05 598 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tmem245B1AZA5 876 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Phf11cB4XVP9 339 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Vmn2r125D3Z3M1 369 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ceacam3E9Q6J4 706 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ctnnd2O35927 1247 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Reps1O54916 795 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Znf143O70230 638 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 IkbkgO88522 412 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Znf703P0CL69 594 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Bop1P97452 732 aaKnown RBP8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Arntl2Q2VPD4 579 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Kcnk6Q3TBV4 313 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Osgin2Q3TEE9 550 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Usp39Q3TIX9 564 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Rnf44Q3UHJ8 407 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Rbm44Q3V089 1013 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Klhl14Q69ZK5 630 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Olig3Q6PFG8 273 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gpr141Q7TQP0 305 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 IlkapQ8R0F6 392 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Olfr352Q8VGJ9 315 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Slc35b2Q91ZN5 431 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ankrd61Q9CQM6 421 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Echdc3Q9D7J9 300 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Lypd2Q9DD23 127 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Trpv4Q9EPK8 871 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 LipaQ9Z0M5 397 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Cldn8Q9Z260 225 aa8.36□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ccdc163A2AGD7 326 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Cldn24D3YXJ9 220 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ifi213D3Z5G0 586 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Olfr564E9PWA8 316 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Htr5bP31387 370 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 MtpnP62774 118 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 PamP97467 979 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Bmp1P98063 991 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ptchd3Q0EEE2 906 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Usp22Q5DU02 525 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Dll1Q61483 722 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Znf423Q80TS5 1292 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tmem62Q8BXJ9 643 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 SinhcafQ8C8M1 221 aaKnown RBP8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Strip2Q8C9H6 844 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Lrp11Q8CB67 483 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Rcor1Q8CFE3 480 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Rab43Q8CG50 210 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 CenpiQ8K1K4 746 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Trpv3Q8K424 791 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Vmn1r84Q8R284 318 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ccdc80Q8R2G6 949 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Mrm1Q99J25 320 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Mphosph6Q9D1Q1 161 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 4933428M09RikQ9D3X3 192 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Wdr5bQ9D7H2 328 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Phospho2Q9D9M5 241 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Cdrt4Q9DA64 179 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gm29797A0A140LIA7 188 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 A0A1L1ST33 502 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Otud3B1AZ99 396 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Pgbd5D3YZI9 523 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 LatO54957 242 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Grpel2O88396 224 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Best1O88870 551 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Mtnd5P03921 607 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 PlgP20918 812 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Oprd1P32300 372 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 PnmtP40935 295 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Dab1P97318 588 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gpsm3Q3U1Z5 159 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ube2zQ3UE37 356 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Lrrc58Q3UGP9 366 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Fcho2Q3UQN2 809 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 JrkQ60976 557 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 DcstampQ7TNJ0 470 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Letm2Q7TNU7 480 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Zfp101Q8BP18 612 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Cpsf4Q8BQZ5 211 aaKnown RBP8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 C1qtnf7Q8BVD7 289 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Sall4Q8BX22 1067 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 SowahcQ8C0J6 512 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Bag5Q8CI32 447 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gramd1cQ8CI52 457 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ntmt1Q8R2U4 223 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Rab7bQ8VEA8 199 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Fitm1Q91V79 292 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 LsrQ99KG5 594 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Hspa14Q99M31 509 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Ssr2Q9CPW5 183 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Hormad1Q9D5T7 392 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Gid8Q9D7M1 228 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tm9sf3Q9ET30 587 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Tnfsf14Q9QYH9 239 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 Cd300ld2A2A7W0 305 aa8.35□□□□□ -1.07
Trim39-201ENSMUST00000042717 1700023F06RikA2AB62 382 aa8.35□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 56.2 ms