RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 PRAP1Q96NZ9 151 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 NPAS2Q99743 824 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 MRPL1Q9BYD6 325 aaKnown RBP12.58□□□□□ -0.4
PHGDH-221ENST00000641573 SRMSQ9H3Y6 488 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 NT5DC2Q9H857 520 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 DMRT3Q9NQL9 472 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 POT1Q9NUX5 634 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 SPASTQ9UBP0 616 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 VPS29Q9UBQ0 182 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 TMED5Q9Y3A6 229 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 TSC22D4Q9Y3Q8 395 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 GON4LQ3T8J9 2241 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 PI4KAP42356 2102 aa12.58□□□□□ -0.4
PHGDH-221ENST00000641573 CEP192Q8TEP8 1941 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 FAM234BA2RU67 622 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 ISM1B1AKI9 464 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 B4DGG1 531 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 BTN3A3O00478 584 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 FBP2O00757 339 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 ANKRD28O15084 1053 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 NRP2O60462 931 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 ETHE1O95571 254 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 CAPNS1P04632 268 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 PRPS2P11908 318 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 BCKDHAP12694 445 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 AMD1P17707 334 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 MAPK1P28482 360 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 IL12AP29459 219 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 CMPK1P30085 196 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 PGM1P36871 562 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 PIK3CBP42338 1070 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 AFF3P51826 1226 aaKnown RBP12.57□□□□□ -0.4
PHGDH-221ENST00000641573 POLR2JP52435 117 aaKnown RBP12.57□□□□□ -0.4
PHGDH-221ENST00000641573 KCNK10P57789 538 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 CSNK1G2P78368 415 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 ART3Q13508 389 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 GPR18Q14330 331 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 SF1Q15637 639 aaKnown RBP12.57□□□□□ -0.4
PHGDH-221ENST00000641573 MMEL1Q495T6 779 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 LYSMD4Q5XG99 296 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 BLOC1S3Q6QNY0 202 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 C16orf89Q6UX73 402 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 ADCK2Q7Z695 626 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 SLC9B2Q86UD5 537 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 FAM20CQ8IXL6 584 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 ADGRF3Q8IZF5 1079 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 NAGSQ8N159 534 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 PROKR1Q8TCW9 393 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 SLC37A2Q8TED4 501 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 TSPEARQ8WU66 669 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 FCRL1Q96LA6 429 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 TEX37Q96LM6 180 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 APOLD1Q96LR9 279 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 BBC3Q96PG8 261 aaPredicted RBP12.57□□□□□ -0.4
PHGDH-221ENST00000641573 PITHD1Q9GZP4 211 aaPredicted RBP12.57□□□□□ -0.4
PHGDH-221ENST00000641573 RHBGQ9H310 441 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 ACTL8Q9H568 366 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 SLC6A20Q9NP91 592 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 MRPS30Q9NP92 439 aaKnown RBP12.57□□□□□ -0.4
PHGDH-221ENST00000641573 NMRK1Q9NWW6 199 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 DLGAP4Q9Y2H0 992 aa12.57□□□□□ -0.4
PHGDH-221ENST00000641573 IGKV1-8A0A0C4DH67 115 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 BBIP1A8MTZ0 92 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 MRASO14807 208 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 SH3BGRLO75368 114 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 MYO1DO94832 1006 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 ACPPP15309 386 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 CAPN3P20807 821 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 JAK1P23458 1154 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 HOXD12P35452 270 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 ZFP36L2P47974 494 aaKnown RBP12.56□□□□□ -0.4
PHGDH-221ENST00000641573 HNRNPKP61978 463 aaKnown RBP eCLIP12.56□□□□□ -0.4
PHGDH-221ENST00000641573 C19orf57Q0VDD7 668 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 PTGR1Q14914 329 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 KIR2DS3Q14952 304 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 TEAD4Q15561 434 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 VPS26BQ4G0F5 336 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 PEAR1Q5VY43 1037 aaPredicted RBP12.56□□□□□ -0.4
PHGDH-221ENST00000641573 NOXRED1Q6NXP6 359 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 SLC23A3Q6PIS1 610 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 VN1R5Q7Z5H4 357 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.56□□□□□ -0.4
PHGDH-221ENST00000641573 DEFB107AQ8IZN7 70 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 DSELQ8IZU8 1212 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 ARHGAP24Q8N264 748 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 OR2L3Q8NG85 312 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 CEP76Q8TAP6 659 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 CHTF18Q8WVB6 975 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 SPDL1Q96EA4 605 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 METTL2AQ96IZ6 378 aaKnown RBP12.56□□□□□ -0.4
PHGDH-221ENST00000641573 SERPINI1Q99574 410 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 ZBTB18Q99592 522 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 THTPAQ9BU02 230 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 DPY30Q9C005 99 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 SLC52A3Q9NQ40 469 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 TMEM184CQ9NVA4 438 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 NDE1Q9NXR1 346 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 BAIAP2L1Q9UHR4 511 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 ADGRE2Q9UHX3 823 aa12.56□□□□□ -0.4
PHGDH-221ENST00000641573 SLC6A14Q9UN76 642 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms