RNA–Protein interactions for RNA: ENST00000616154.1

CDX1-202, Transcript of caudal type homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CDX1, Length 1,343 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-202ENST00000616154 HAS2Q92819 552 aa17.98■□□□□ 0.47
CDX1-202ENST00000616154 RERGQ96A58 199 aaPredicted RBP17.98■□□□□ 0.47
CDX1-202ENST00000616154 MMABQ96EY8 250 aaPredicted RBP17.98■□□□□ 0.47
CDX1-202ENST00000616154 NDNQ99608 321 aa17.98■□□□□ 0.47
CDX1-202ENST00000616154 YIPF2Q9BWQ6 316 aa17.98■□□□□ 0.47
CDX1-202ENST00000616154 RIC8BQ9NVN3 520 aa17.98■□□□□ 0.47
CDX1-202ENST00000616154 MOCS1Q9NZB8 636 aa17.98■□□□□ 0.47
CDX1-202ENST00000616154 PTGFRNQ9P2B2 879 aa17.98■□□□□ 0.47
CDX1-202ENST00000616154 MRPS2Q9Y399 296 aaKnown RBP17.98■□□□□ 0.47
CDX1-202ENST00000616154 SCN2AQ99250 2005 aa17.97■□□□□ 0.47
CDX1-202ENST00000616154 MYO7BQ6PIF6 2116 aa17.97■□□□□ 0.47
CDX1-202ENST00000616154 LOC102723996A0A087X1L8 192 aa17.97■□□□□ 0.47
CDX1-202ENST00000616154 TRAV17A0A0B4J275 112 aa17.97■□□□□ 0.47
CDX1-202ENST00000616154 A0A1B0GUH1 482 aa17.97■□□□□ 0.47
CDX1-202ENST00000616154 ENO4A6NNW6 628 aa17.97■□□□□ 0.47
CDX1-202ENST00000616154 TXNDC9O14530 226 aa17.97■□□□□ 0.47
CDX1-202ENST00000616154 FFAR3O14843 346 aa17.97■□□□□ 0.47
CDX1-202ENST00000616154 GPR42O15529 346 aa17.97■□□□□ 0.47
CDX1-202ENST00000616154 ZBTB14O43829 449 aa17.97■□□□□ 0.47
CDX1-202ENST00000616154 TSPAN12O95859 305 aa17.97■□□□□ 0.47
CDX1-202ENST00000616154 HEXBP07686 556 aa17.97■□□□□ 0.47
CDX1-202ENST00000616154 ANXA5P08758 320 aa17.97■□□□□ 0.47
CDX1-202ENST00000616154 PLTPP55058 493 aa17.97■□□□□ 0.47
CDX1-202ENST00000616154 CDKN2DP55273 166 aa17.97■□□□□ 0.47
CDX1-202ENST00000616154 ABATP80404 500 aa17.97■□□□□ 0.47
CDX1-202ENST00000616154 RIPOR1Q6ZS17 1223 aa17.97■□□□□ 0.47
CDX1-202ENST00000616154 DRC3Q9H069 523 aa17.97■□□□□ 0.47
CDX1-202ENST00000616154 PLA2G3Q9NZ20 509 aa17.97■□□□□ 0.47
CDX1-202ENST00000616154 SLC16A5O15375 505 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 FOXS1O43638 330 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 JRKO75564 520 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 C8GP07360 202 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 IMPA1P29218 277 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 RGS4P49798 205 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 TDGF1P3P51864 188 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 VSNL1P62760 191 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 FASTKD3Q14CZ7 662 aaKnown RBP17.96■□□□□ 0.46
CDX1-202ENST00000616154 PCOLCEQ15113 449 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 C1QL3Q5VWW1 255 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 PAQR3Q6TCH7 311 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 TMEM205Q6UW68 189 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 ZC3H7AQ8IWR0 971 aaKnown RBP17.96■□□□□ 0.46
CDX1-202ENST00000616154 SIRT6Q8N6T7 355 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 PPFIBP2Q8ND30 876 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 EEF1AKMT1Q8WVE0 214 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 CFAP36Q96G28 342 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 MAGEB10Q96LZ2 347 aaPredicted RBP17.96■□□□□ 0.46
CDX1-202ENST00000616154 TAAR6Q96RI8 345 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 MCMBPQ9BTE3 642 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 PARD6BQ9BYG5 372 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 ZNF700Q9H0M5 742 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 SLC17A6Q9P2U8 582 aa17.96■□□□□ 0.46
CDX1-202ENST00000616154 A0A0A6YYC8 382 aaPredicted RBP17.95■□□□□ 0.46
CDX1-202ENST00000616154 I3L1I5 382 aaPredicted RBP17.95■□□□□ 0.46
CDX1-202ENST00000616154 P2RX6O15547 441 aa17.95■□□□□ 0.46
CDX1-202ENST00000616154 WFS1O76024 890 aa17.95■□□□□ 0.46
CDX1-202ENST00000616154 CELA2AP08217 269 aa17.95■□□□□ 0.46
CDX1-202ENST00000616154 MYBL2P10244 700 aa17.95■□□□□ 0.46
CDX1-202ENST00000616154 AP2B1P63010 937 aa17.95■□□□□ 0.46
CDX1-202ENST00000616154 MGAT5Q09328 741 aa17.95■□□□□ 0.46
CDX1-202ENST00000616154 PDIA2Q13087 525 aaKnown RBP17.95■□□□□ 0.46
CDX1-202ENST00000616154 FAM53BQ14153 422 aa17.95■□□□□ 0.46
CDX1-202ENST00000616154 FAAH2Q6GMR7 532 aa17.95■□□□□ 0.46
CDX1-202ENST00000616154 UBE2R2Q712K3 238 aaPredicted RBP17.95■□□□□ 0.46
CDX1-202ENST00000616154 SLC26A11Q86WA9 606 aa17.95■□□□□ 0.46
CDX1-202ENST00000616154 RELL1Q8IUW5 271 aa17.95■□□□□ 0.46
CDX1-202ENST00000616154 FBXO36Q8NEA4 188 aa17.95■□□□□ 0.46
CDX1-202ENST00000616154 IFT81Q8WYA0 676 aa17.95■□□□□ 0.46
CDX1-202ENST00000616154 NR4A3Q92570 626 aa17.95■□□□□ 0.46
CDX1-202ENST00000616154 RNF32Q9H0A6 362 aa17.95■□□□□ 0.46
CDX1-202ENST00000616154 NFU1Q9UMS0 254 aa17.95■□□□□ 0.46
CDX1-202ENST00000616154 PDE10AQ9Y233 779 aa17.95■□□□□ 0.46
CDX1-202ENST00000616154 CSMD1Q96PZ7 3565 aa17.95■□□□□ 0.46
CDX1-202ENST00000616154 HAT1O14929 419 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 EIF3HO15372 352 aaKnown RBP eCLIP17.94■□□□□ 0.46
CDX1-202ENST00000616154 ZG16O60844 167 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 EFNA3P52797 238 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 ILF2Q12905 390 aaKnown RBP17.94■□□□□ 0.46
CDX1-202ENST00000616154 SYT16Q17RD7 645 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 HP1BP3Q5SSJ5 553 aaPredicted RBP17.94■□□□□ 0.46
CDX1-202ENST00000616154 HECTD2Q5U5R9 776 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 FAM45BPQ6NSW5 357 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 CYS1Q717R9 158 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 ADCK2Q7Z695 626 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 FAM45AQ8TCE6 357 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 MCOLN3Q8TDD5 553 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 RELTQ969Z4 430 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 PDLIM5Q96HC4 596 aaKnown RBP17.94■□□□□ 0.46
CDX1-202ENST00000616154 CCDC138Q96M89 665 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 FMO2Q99518 471 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 TUBB6Q9BUF5 446 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 TSPYL1Q9H0U9 437 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 PARVBQ9HBI1 364 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 ADAMTS6Q9UKP5 1117 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 MKL2Q9ULH7 1088 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 ENTPD4Q9Y227 616 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 VWA7Q9Y334 891 aa17.94■□□□□ 0.46
CDX1-202ENST00000616154 SYF2O95926 243 aaKnown RBP17.93■□□□□ 0.46
CDX1-202ENST00000616154 UQCRHP07919 91 aa17.93■□□□□ 0.46
CDX1-202ENST00000616154 ITGAMP11215 1152 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms