RNA–Protein interactions for RNA: ENST00000603885.5

CCDC12-208, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-208ENST00000603885 POPDC3Q9HBV1 291 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 TXNDC16Q9P2K2 825 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 PCDHGA10Q9Y5H3 936 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 CSAG2Q9Y5P2 127 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 ESPL1Q14674 2120 aa17.15■□□□□ 0.34
CCDC12-208ENST00000603885 USP9YO00507 2555 aaPredicted RBP17.14■□□□□ 0.33
CCDC12-208ENST00000603885 TRBC2A0A5B9 178 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 SGK494L7N484 410 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 CDC7O00311 574 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 NDUFS4O43181 175 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 OR1F1O43749 312 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 SERPINA7P05543 415 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 CYC1P08574 325 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 PRR35P0CG20 571 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 C8orf89P0DMQ9 161 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 GLRBP48167 497 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 ETF1P62495 437 aaKnown RBP17.14■□□□□ 0.33
CCDC12-208ENST00000603885 MEF2AQ02078 507 aaPredicted RBP17.14■□□□□ 0.33
CCDC12-208ENST00000603885 MFAP5Q13361 173 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 CSHL1Q14406 222 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 MINDY4Q4G0A6 757 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 CRB2Q5IJ48 1285 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 FHL5Q5TD97 284 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 MFSD4BQ5TF39 518 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 TMEM205Q6UW68 189 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 LINC00696Q6ZRV3 163 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 FRA10AC1Q70Z53 315 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 ADAMTSL2Q86TH1 951 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 OR51Q1Q8NH59 317 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 SLC5A11Q8WWX8 675 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 NEIL2Q969S2 332 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 CNDP1Q96KN2 507 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 LMF1Q96S06 567 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 EGFL8Q99944 293 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 VN1R1Q9GZP7 353 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 ZNF700Q9H0M5 742 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 GPAMQ9HCL2 828 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 ASF1BQ9NVP2 202 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 HCN3Q9P1Z3 774 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 UTP11Q9Y3A2 253 aaKnown RBP17.14■□□□□ 0.33
CCDC12-208ENST00000603885 DYRK1BQ9Y463 629 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 COPG1Q9Y678 874 aaKnown RBP17.14■□□□□ 0.33
CCDC12-208ENST00000603885 SLC22A7Q9Y694 548 aa17.14■□□□□ 0.33
CCDC12-208ENST00000603885 JRKO75564 520 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 UQCRHP07919 91 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 SSTR1P30872 391 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 XCR1P46094 333 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 AP2B1P63010 937 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 CDKL1Q00532 357 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 POU4F1Q01851 419 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 PWP1Q13610 501 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 HERC3Q15034 1050 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 CATSPEREQ5SY80 951 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 SYT10Q6XYQ8 523 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 RIPOR1Q6ZS17 1223 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 THOC6Q86W42 341 aaKnown RBP17.13■□□□□ 0.33
CCDC12-208ENST00000603885 CEP97Q8IW35 865 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 C17orf53Q8N3J3 647 aaPredicted RBP17.13■□□□□ 0.33
CCDC12-208ENST00000603885 ANKRD49Q8WVL7 239 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 TSNARE1Q96NA8 513 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 MCMBPQ9BTE3 642 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 SMYD2Q9NRG4 433 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 GRHL1Q9NZI5 618 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 CTNNAL1Q9UBT7 734 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 NAALAD2Q9Y3Q0 740 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 OARD1Q9Y530 152 aa17.13■□□□□ 0.33
CCDC12-208ENST00000603885 SPTAN1Q13813 2472 aaKnown RBP17.12■□□□□ 0.33
CCDC12-208ENST00000603885 RDH16O75452 317 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 PIAS1O75925 651 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 KLHL18O94889 574 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 AGFG2O95081 481 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 SERPIND1P05546 499 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 ICAM2P13598 275 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 HNMTP50135 292 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 EFNA3P52797 238 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 SKP1P63208 163 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 CAV1Q03135 178 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 RGS1Q08116 209 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 MRPL49Q13405 166 aaKnown RBP17.12■□□□□ 0.33
CCDC12-208ENST00000603885 ZNF169Q14929 603 aaPredicted RBP17.12■□□□□ 0.33
CCDC12-208ENST00000603885 PCOLCEQ15113 449 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 TLR1Q15399 786 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 TSNQ15631 228 aaKnown RBP17.12■□□□□ 0.33
CCDC12-208ENST00000603885 B3GNTL1Q67FW5 361 aaPredicted RBP17.12■□□□□ 0.33
CCDC12-208ENST00000603885 PDSS2Q86YH6 399 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 BRIX1Q8TDN6 353 aaKnown RBP17.12■□□□□ 0.33
CCDC12-208ENST00000603885 TSPAN17Q96FV3 270 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 TUBB6Q9BUF5 446 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 RAB17Q9H0T7 212 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 PELI2Q9HAT8 420 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 AGPAT4Q9NRZ5 378 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 PTGFRNQ9P2B2 879 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 C19orf25Q9UFG5 118 aaPredicted RBP17.12■□□□□ 0.33
CCDC12-208ENST00000603885 ZFP69BQ9UJL9 534 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 SLC22A14Q9Y267 594 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 KCNE2Q9Y6J6 123 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 SCN3AQ9NY46 2000 aa17.12■□□□□ 0.33
CCDC12-208ENST00000603885 TCRBV9S1A1TA0A576 114 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 DYTNA2CJ06 578 aa17.11■□□□□ 0.33
CCDC12-208ENST00000603885 CXorf49A8MYA2 514 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms