RNA–Protein interactions for RNA: ENST00000602723.5

CSMD1-217, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 10,938 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-217ENST00000602723 HMGCS1Q01581 520 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 CYBRD1Q53TN4 286 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 MSANTD3Q96H12 275 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 TM9SF3Q9HD45 589 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 SALL4Q9UJQ4 1053 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 KLK1P06870 262 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 WDR4P57081 412 aaKnown RBP9.34□□□□□ -0.91
CSMD1-217ENST00000602723 TMEM145Q8NBT3 493 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 TBCCD1Q9NVR7 557 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 PTBP2Q9UKA9 531 aaKnown RBP9.34□□□□□ -0.91
CSMD1-217ENST00000602723 CSNK2A2P19784 350 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-217ENST00000602723 FRG2Q64ET8 278 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 COMTD1Q86VU5 262 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 GALNT11Q8NCW6 608 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 PYURFQ96I23 114 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 FRG2BQ96QU4 278 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 OR2B2Q9GZK3 357 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 RGCCQ9H4X1 137 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 DLGAP1O14490 977 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 NARSO43776 548 aaKnown RBP9.34□□□□□ -0.91
CSMD1-217ENST00000602723 DDNO94850 711 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-217ENST00000602723 HCAR3P49019 387 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 CDK10Q15131 360 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 AMZ1Q400G9 498 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 ZNF514Q96K75 400 aaPredicted RBP9.34□□□□□ -0.91
CSMD1-217ENST00000602723 MAPKAP1Q9BPZ7 522 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 TTYH3Q9C0H2 523 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 VNN3Q9NY84 501 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 LAMP5Q9UJQ1 280 aa9.34□□□□□ -0.91
CSMD1-217ENST00000602723 OR51F1A6NGY5 319 aa9.34□□□□□ -0.92
CSMD1-217ENST00000602723 CH25HO95992 272 aa9.34□□□□□ -0.92
CSMD1-217ENST00000602723 IFNA2P01563 188 aa9.34□□□□□ -0.92
CSMD1-217ENST00000602723 HTR1AP08908 422 aa9.34□□□□□ -0.92
CSMD1-217ENST00000602723 ARL2P36404 184 aa9.34□□□□□ -0.92
CSMD1-217ENST00000602723 TAS2R43P59537 309 aa9.34□□□□□ -0.92
CSMD1-217ENST00000602723 FCAMRQ8WWV6 532 aa9.34□□□□□ -0.92
CSMD1-217ENST00000602723 HNRNPABQ99729 332 aaKnown RBP9.34□□□□□ -0.92
CSMD1-217ENST00000602723 HEPHQ9BQS7 1158 aa9.34□□□□□ -0.92
CSMD1-217ENST00000602723 TLE6Q9H808 572 aa9.34□□□□□ -0.92
CSMD1-217ENST00000602723 EDARQ9UNE0 448 aa9.34□□□□□ -0.92
CSMD1-217ENST00000602723 H3BSH0 61 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 CDC7O00311 574 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 PDYNP01213 254 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 KCNJ11Q14654 390 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF829Q3KNS6 432 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-217ENST00000602723 PAQR3Q6TCH7 311 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 ARSKQ6UWY0 536 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 PIAS4Q8N2W9 510 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-217ENST00000602723 PHTF2Q8N3S3 785 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 OR8S1Q8NH09 359 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 HCAR2Q8TDS4 363 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 DPEP2Q9H4A9 486 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 SIRPGQ9P1W8 387 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 TRIP12Q14669 1992 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-217ENST00000602723 OR4Q2P0C623 313 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 ZNF16P17020 682 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-217ENST00000602723 SLC36A4Q6YBV0 504 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 VTCN1Q7Z7D3 282 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 PIM3Q86V86 326 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 ACBD6Q9BR61 282 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 CD93Q9NPY3 652 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 A0A1B0GVT2 93 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 OAZ2O95190 189 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 CSTBP04080 98 aaKnown RBP9.33□□□□□ -0.92
CSMD1-217ENST00000602723 CHRM1P11229 460 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-217ENST00000602723 MAGEA8P43361 318 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 DGKQP52824 942 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 HADHBP55084 474 aaKnown RBP9.33□□□□□ -0.92
CSMD1-217ENST00000602723 SEMA3AQ14563 771 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 HFE2Q6ZVN8 426 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 DPEP3Q9H4B8 488 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 UTS2RQ9UKP6 389 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 HYKKA2RU49 373 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 ANXA3P12429 323 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 NR2C1P13056 603 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 PRAMEF14Q5SWL7 426 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 PRAMEF13Q5VWM6 474 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 NRSN1Q8IZ57 195 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 BORCS8Q96FH0 119 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 BTBD1Q9H0C5 482 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 AGAP5A6NIR3 686 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 SOX14O95416 240 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 NRLP54845 237 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 SLC2A7Q6PXP3 512 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 XKR5Q6UX68 686 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 ITFG2Q969R8 447 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 DGAT2Q96PD7 388 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 TIMM8BQ9Y5J9 83 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-217ENST00000602723 WASP42768 502 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 RFTN1Q14699 578 aaPredicted RBP9.33□□□□□ -0.92
CSMD1-217ENST00000602723 LRRN1Q6UXK5 716 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 FAM46DQ8NEK8 389 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 GPR20Q99678 358 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 PCDHB14Q9Y5E9 798 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 KIF13AQ9H1H9 1805 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 ERI3O43414 337 aaKnown RBP9.33□□□□□ -0.92
CSMD1-217ENST00000602723 BCHEP06276 602 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 TFPTP0C1Z6 253 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 GRIA1P42261 906 aa9.33□□□□□ -0.92
CSMD1-217ENST00000602723 RHBDL3P58872 404 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms