RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 MASP2O00187 686 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 LCMT2O60294 686 aaKnown RBP14.33□□□□□ -0.12
TRIM28-205ENST00000595028 FAM155BO75949 473 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 NSA2O95478 260 aaKnown RBP14.33□□□□□ -0.12
TRIM28-205ENST00000595028 SLC35G6P0C7Q6 338 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 CTAGE8P0CG41 777 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 CCDC166P0CW27 439 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 CD1DP15813 335 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 AVPR1BP47901 424 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 SLC6A12P48065 614 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 HNMTP50135 292 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 SOX8P57073 446 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 ATP6V0D1P61421 351 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 REEP5Q00765 189 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 MEF2AQ02078 507 aaPredicted RBP14.33□□□□□ -0.12
TRIM28-205ENST00000595028 RAPSNQ13702 412 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 MYBPC3Q14896 1274 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 TUBB8Q3ZCM7 444 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 CATSPEREQ5SY80 951 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 VWA5B1Q5TIE3 1220 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 TMPRSS11BQ86T26 416 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 CTAGE6Q86UF2 777 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 HPS6Q86YV9 775 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 ZC3H7AQ8IWR0 971 aaKnown RBP14.33□□□□□ -0.12
TRIM28-205ENST00000595028 CTAGE4Q8IX94 777 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 SPATA6LQ8N4H0 392 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 OR9A4Q8NGU2 314 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 ZCCHC10Q8TBK6 192 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 SLC13A3Q8WWT9 602 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 RHBDF1Q96CC6 855 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 VPS50Q96JG6 964 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 TSNARE1Q96NA8 513 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 SMAD5Q99717 465 aaKnown RBP14.33□□□□□ -0.12
TRIM28-205ENST00000595028 MACROD1Q9BQ69 325 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 TGIF2Q9GZN2 237 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 PELI2Q9HAT8 420 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 MTRF1LQ9UGC7 380 aaKnown RBP14.33□□□□□ -0.12
TRIM28-205ENST00000595028 DMGDHQ9UI17 866 aaKnown RBP14.33□□□□□ -0.12
TRIM28-205ENST00000595028 C3orf18Q9UK00 162 aa14.33□□□□□ -0.12
TRIM28-205ENST00000595028 CNTRLQ7Z7A1 2325 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 H0YIG0 161 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 DPM1O60762 260 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 ALOX12BO75342 701 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 ACPPP15309 386 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 IL1RNP18510 177 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 MAT1AQ00266 395 aaKnown RBP14.32□□□□□ -0.12
TRIM28-205ENST00000595028 AIMP2Q13155 320 aaKnown RBP14.32□□□□□ -0.12
TRIM28-205ENST00000595028 CSHL1Q14406 222 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 TGFBIQ15582 683 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 SYT16Q17RD7 645 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 NADK2Q4G0N4 442 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 CEP128Q6ZU80 1094 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 PRSS41Q7RTY9 318 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 CMC1Q7Z7K0 106 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 KLHDC8AQ8IYD2 350 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 TBC1D19Q8N5T2 526 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 KCT2Q8NC54 265 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 ZNF740Q8NDX6 193 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 OR11G2Q8NGC1 345 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 UBXN10Q96LJ8 280 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 MESP1Q9BRJ9 268 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 YIPF2Q9BWQ6 316 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 ATP13A2Q9NQ11 1180 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 NINJ2Q9NZG7 142 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 PLEKHB1Q9UF11 243 aaPredicted RBP14.32□□□□□ -0.12
TRIM28-205ENST00000595028 SLC22A14Q9Y267 594 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 KCNE2Q9Y6J6 123 aa14.32□□□□□ -0.12
TRIM28-205ENST00000595028 A0A1W2PQ72 361 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 NCF1BA6NI72 391 aaPredicted RBP14.31□□□□□ -0.12
TRIM28-205ENST00000595028 NCF1CA8MVU1 366 aaPredicted RBP14.31□□□□□ -0.12
TRIM28-205ENST00000595028 IDSB3KWA1 339 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 MAP2K7O14733 419 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 NDUFS4O43181 175 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 OR1F1O43749 312 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 KLHL41O60662 606 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 WDR47O94967 919 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 ALPPP05187 535 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 SLC35E2BP0CK96 405 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 NCF1P14598 390 aaPredicted RBP14.31□□□□□ -0.12
TRIM28-205ENST00000595028 ITGA3P26006 1051 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 SCTRP47872 440 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 OR4D1Q15615 310 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 C18orf21Q32NC0 220 aaPredicted RBP14.31□□□□□ -0.12
TRIM28-205ENST00000595028 UBAP2Q5T6F2 1119 aaKnown RBP14.31□□□□□ -0.12
TRIM28-205ENST00000595028 NXPE4Q6UWF7 544 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 LAPTM4BQ86VI4 370 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 GPSM1Q86YR5 675 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 RELL1Q8IUW5 271 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 TCAIMQ8N3R3 496 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 KIF18AQ8NI77 898 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 AIF1LQ9BQI0 150 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 TMEM79Q9BSE2 394 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 ACSS3Q9H6R3 686 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 ANKHQ9HCJ1 492 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 WWOXQ9NZC7 414 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 C5AR2Q9P296 337 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 SLC22A7Q9Y694 548 aa14.31□□□□□ -0.12
TRIM28-205ENST00000595028 PRRC2CQ9Y520 2896 aaKnown RBP14.31□□□□□ -0.12
TRIM28-205ENST00000595028 SGK494L7N484 410 aa14.3□□□□□ -0.12
TRIM28-205ENST00000595028 RDH16O75452 317 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms