RNA–Protein interactions for RNA: ENST00000593582.5

TRIM28-203, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-203ENST00000593582 THOC6Q86W42 341 aaKnown RBP14.47□□□□□ -0.09
TRIM28-203ENST00000593582 ZC3H7AQ8IWR0 971 aaKnown RBP14.47□□□□□ -0.09
TRIM28-203ENST00000593582 Q8NA96 180 aa14.47□□□□□ -0.09
TRIM28-203ENST00000593582 KCT2Q8NC54 265 aa14.47□□□□□ -0.09
TRIM28-203ENST00000593582 OR51Q1Q8NH59 317 aa14.47□□□□□ -0.09
TRIM28-203ENST00000593582 ZCCHC10Q8TBK6 192 aa14.47□□□□□ -0.09
TRIM28-203ENST00000593582 NEIL2Q969S2 332 aa14.47□□□□□ -0.09
TRIM28-203ENST00000593582 THOC3Q96J01 351 aaKnown RBP14.47□□□□□ -0.09
TRIM28-203ENST00000593582 TSNARE1Q96NA8 513 aa14.47□□□□□ -0.09
TRIM28-203ENST00000593582 GPR22Q99680 433 aa14.47□□□□□ -0.09
TRIM28-203ENST00000593582 MESP1Q9BRJ9 268 aa14.47□□□□□ -0.09
TRIM28-203ENST00000593582 DERL2Q9GZP9 239 aa14.47□□□□□ -0.09
TRIM28-203ENST00000593582 ILKAPQ9H0C8 392 aaPredicted RBP14.47□□□□□ -0.09
TRIM28-203ENST00000593582 CAB39LQ9H9S4 337 aa14.47□□□□□ -0.09
TRIM28-203ENST00000593582 ZNF160Q9HCG1 818 aa14.47□□□□□ -0.09
TRIM28-203ENST00000593582 SLC22A14Q9Y267 594 aa14.47□□□□□ -0.09
TRIM28-203ENST00000593582 SLC22A7Q9Y694 548 aa14.47□□□□□ -0.09
TRIM28-203ENST00000593582 SGK494L7N484 410 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 URI1O94763 535 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-203ENST00000593582 SERPIND1P05546 499 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 CCDC166P0CW27 439 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 COX6A1P12074 109 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 SPRP35270 261 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-203ENST00000593582 SKP1P63208 163 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 SLC7A5Q01650 507 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 EEF1A2Q05639 463 aaKnown RBP14.46□□□□□ -0.09
TRIM28-203ENST00000593582 RGS1Q08116 209 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 HERC3Q15034 1050 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 INPP5JQ15735 1006 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-203ENST00000593582 KBTBD12Q3ZCT8 623 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 PLEKHN1Q494U1 663 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-203ENST00000593582 MINDY4Q4G0A6 757 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 CATSPEREQ5SY80 951 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 GRTP1Q5TC63 336 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 MFSD4BQ5TF39 518 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 FAAH2Q6GMR7 532 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 PRSS41Q7RTY9 318 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 KBTBD2Q8IY47 623 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 IQCKQ8N0W5 287 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 METTL21AQ8WXB1 218 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 PELI2Q9HAT8 420 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 ZBTB20Q9HC78 741 aaPredicted RBP14.46□□□□□ -0.09
TRIM28-203ENST00000593582 LRRC4CQ9HCJ2 640 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 MAP10Q9P2G4 905 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 MDC1Q14676 2089 aaKnown RBP14.46□□□□□ -0.09
TRIM28-203ENST00000593582 FLNCQ14315 2725 aa14.46□□□□□ -0.09
TRIM28-203ENST00000593582 NBASA2RRP1 2371 aa14.46□□□□□ -0.1
TRIM28-203ENST00000593582 A0A1W2PQ72 361 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 ESYT3A0FGR9 886 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 PHGDHO43175 533 aaKnown RBP14.45□□□□□ -0.1
TRIM28-203ENST00000593582 KLHL18O94889 574 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 WISP3O95389 354 aaPredicted RBP14.45□□□□□ -0.1
TRIM28-203ENST00000593582 CYC1P08574 325 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 C8orf89P0DMQ9 161 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 AHRP35869 848 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 XCR1P46094 333 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 SNRPNP63162 240 aaKnown RBP14.45□□□□□ -0.1
TRIM28-203ENST00000593582 Q0VFX4 171 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 TGFBIQ15582 683 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 WHAMMP3Q1A5X7 153 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 NXPE4Q6UWF7 544 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 TMPRSS11BQ86T26 416 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 SPATA6LQ8N4H0 392 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 PPM1NQ8N819 430 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 GALNT11Q8NCW6 608 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 ZNF740Q8NDX6 193 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 RHBDF1Q96CC6 855 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 WDR77Q9BQA1 342 aaPredicted RBP14.45□□□□□ -0.1
TRIM28-203ENST00000593582 AIF1LQ9BQI0 150 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 UNKQ9C0B0 810 aaKnown RBP14.45□□□□□ -0.1
TRIM28-203ENST00000593582 VN1R1Q9GZP7 353 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 EPS8L2Q9H6S3 715 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 RIC8BQ9NVN3 520 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 HCN3Q9P1Z3 774 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 ZFP69BQ9UJL9 534 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 NAALAD2Q9Y3Q0 740 aa14.45□□□□□ -0.1
TRIM28-203ENST00000593582 SETXQ7Z333 2677 aaKnown RBP14.45□□□□□ -0.1
TRIM28-203ENST00000593582 LOC102723996A0A087X1L8 192 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 IGHV1-45A0A0A0MS14 117 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 NCF1BA6NI72 391 aaPredicted RBP14.44□□□□□ -0.1
TRIM28-203ENST00000593582 NCF1CA8MVU1 366 aaPredicted RBP14.44□□□□□ -0.1
TRIM28-203ENST00000593582 RDH16O75452 317 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 WDR47O94967 919 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 C1QAP02745 245 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 PRR35P0CG20 571 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 ICAM2P13598 275 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 NCF1P14598 390 aaPredicted RBP14.44□□□□□ -0.1
TRIM28-203ENST00000593582 GNAZP19086 355 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 SCTRP47872 440 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 RAB10P61026 200 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 ATP6V0D1P61421 351 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 AP2B1P63010 937 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 REEP5Q00765 189 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 NAB1Q13506 487 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 ZKSCAN8Q15776 578 aaPredicted RBP14.44□□□□□ -0.1
TRIM28-203ENST00000593582 PRR30Q53SZ7 412 aaPredicted RBP14.44□□□□□ -0.1
TRIM28-203ENST00000593582 NIPAL1Q6NVV3 410 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 TMEM205Q6UW68 189 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 IGFL2Q6UWQ7 119 aa14.44□□□□□ -0.1
TRIM28-203ENST00000593582 ISLR2Q6UXK2 745 aa14.44□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms