RNA–Protein interactions for RNA: ENST00000592535.5

APOC1-208, Transcript of apolipoprotein C1, humanhuman

TSL 1 (best)

Gene APOC1, Length 430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-208ENST00000592535 OR51Q1Q8NH59 317 aa13.14□□□□□ -0.31
APOC1-208ENST00000592535 FBXO25Q8TCJ0 367 aa13.14□□□□□ -0.31
APOC1-208ENST00000592535 SLC5A11Q8WWX8 675 aa13.14□□□□□ -0.31
APOC1-208ENST00000592535 ANKRD7Q92527 254 aa13.14□□□□□ -0.31
APOC1-208ENST00000592535 CDKL2Q92772 493 aa13.14□□□□□ -0.31
APOC1-208ENST00000592535 MOCOSQ96EN8 888 aa13.14□□□□□ -0.31
APOC1-208ENST00000592535 C19orf60Q96EN9 201 aa13.14□□□□□ -0.31
APOC1-208ENST00000592535 EGFL8Q99944 293 aa13.14□□□□□ -0.31
APOC1-208ENST00000592535 SARGQ9BW04 601 aa13.14□□□□□ -0.31
APOC1-208ENST00000592535 ILKAPQ9H0C8 392 aaPredicted RBP13.14□□□□□ -0.31
APOC1-208ENST00000592535 RAB17Q9H0T7 212 aa13.14□□□□□ -0.31
APOC1-208ENST00000592535 POPDC3Q9HBV1 291 aa13.14□□□□□ -0.31
APOC1-208ENST00000592535 ANKHQ9HCJ1 492 aa13.14□□□□□ -0.31
APOC1-208ENST00000592535 MAP10Q9P2G4 905 aa13.14□□□□□ -0.31
APOC1-208ENST00000592535 CTNNAL1Q9UBT7 734 aa13.14□□□□□ -0.31
APOC1-208ENST00000592535 MKL2Q9ULH7 1088 aa13.14□□□□□ -0.31
APOC1-208ENST00000592535 DYRK1BQ9Y463 629 aa13.14□□□□□ -0.31
APOC1-208ENST00000592535 OARD1Q9Y530 152 aa13.14□□□□□ -0.31
APOC1-208ENST00000592535 CPAMD8Q8IZJ3 1885 aa13.14□□□□□ -0.31
APOC1-208ENST00000592535 ESPL1Q14674 2120 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 CNTRLQ7Z7A1 2325 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 FLNBO75369 2602 aaKnown RBP13.13□□□□□ -0.31
APOC1-208ENST00000592535 SPENQ96T58 3664 aaKnown RBP13.13□□□□□ -0.31
APOC1-208ENST00000592535 LOC102723996A0A087X1L8 192 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 A0A1W2PQ72 361 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 FAM159BA6NKW6 160 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 PHGDHO43175 533 aaKnown RBP13.13□□□□□ -0.31
APOC1-208ENST00000592535 RDH16O75452 317 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 KLHL18O94889 574 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 CELA2AP08217 269 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 SLC35G6P0C7Q6 338 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 SLC12A2P55011 1212 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 CDKL1Q00532 357 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 POU4F1Q01851 419 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 CSHL1Q14406 222 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 PCOLCEQ15113 449 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 C18orf21Q32NC0 220 aaPredicted RBP13.13□□□□□ -0.31
APOC1-208ENST00000592535 TMEM205Q6UW68 189 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 IGFL2Q6UWQ7 119 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 LINC00696Q6ZRV3 163 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 C3orf62Q6ZUJ4 267 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 FRA10AC1Q70Z53 315 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 CUZD1Q86UP6 607 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 CCDC25Q86WR0 208 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 KBTBD2Q8IY47 623 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 SPATA6LQ8N4H0 392 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 CISD2Q8N5K1 135 aaKnown RBP13.13□□□□□ -0.31
APOC1-208ENST00000592535 AMER2Q8N7J2 671 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 PPP4R1Q8TF05 950 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 SNRNP40Q96DI7 357 aaKnown RBP13.13□□□□□ -0.31
APOC1-208ENST00000592535 RBBP8Q99708 897 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 CPNE1Q99829 537 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 WDR77Q9BQA1 342 aaPredicted RBP13.13□□□□□ -0.31
APOC1-208ENST00000592535 FAM129AQ9BZQ8 928 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 VN1R1Q9GZP7 353 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 TXNDC16Q9P2K2 825 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 SLC22A14Q9Y267 594 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 NAALAD2Q9Y3Q0 740 aa13.13□□□□□ -0.31
APOC1-208ENST00000592535 CTAGE15A4D2H0 777 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 ZNF860A6NHJ4 632 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 TCP11X1B4DZS4 312 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 NDUFS4O43181 175 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 SERPIND1P05546 499 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 GSTA2P09210 222 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 PRR35P0CG20 571 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 C8orf89P0DMQ9 161 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 GP5P40197 560 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 XCR1P46094 333 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 SCTRP47872 440 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 REEP5Q00765 189 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 CAV1Q03135 178 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 ILF2Q12905 390 aaKnown RBP13.12□□□□□ -0.31
APOC1-208ENST00000592535 USP10Q14694 798 aaKnown RBP13.12□□□□□ -0.31
APOC1-208ENST00000592535 MINDY4Q4G0A6 757 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 MFSD4BQ5TF39 518 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 ISLR2Q6UXK2 745 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 LANCL3Q6ZV70 420 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 CYS1Q717R9 158 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 TMPRSS11BQ86T26 416 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 ADAMTSL2Q86TH1 951 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 CTAGE6Q86UF2 777 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 CTAGE3PQ8IX95 158 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 BRIX1Q8TDN6 353 aaKnown RBP13.12□□□□□ -0.31
APOC1-208ENST00000592535 PSMF1Q92530 271 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 TSPAN17Q96FV3 270 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 GPR22Q99680 433 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 PHACTR1Q9C0D0 580 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 DERL2Q9GZP9 239 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 ZNF700Q9H0M5 742 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 EPS8L2Q9H6S3 715 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 PELI2Q9HAT8 420 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 RIC8BQ9NVN3 520 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 ASF1BQ9NVP2 202 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 ZFP69BQ9UJL9 534 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 PCDHGA10Q9Y5H3 936 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 SLC22A7Q9Y694 548 aa13.12□□□□□ -0.31
APOC1-208ENST00000592535 IGHV3-20A0A0C4DH32 117 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 ESYT3A0FGR9 886 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 OR2W5A6NFC9 320 aa13.11□□□□□ -0.31
APOC1-208ENST00000592535 NCF1BA6NI72 391 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms