RNA–Protein interactions for RNA: ENST00000589823.6

VMP1-210, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-210ENST00000589823 CAPN1P07384 714 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 CHRNGP07510 517 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 RBMS1P29558 406 aaKnown RBP13.01□□□□□ -0.33
VMP1-210ENST00000589823 ETV5P41161 510 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 KRT6CP48668 564 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 RGS1Q08116 209 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 BST1Q10588 318 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 PWP1Q13610 501 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 DDX39BQ13838 428 aaKnown RBP13.01□□□□□ -0.33
VMP1-210ENST00000589823 GRM7Q14831 915 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.01□□□□□ -0.33
VMP1-210ENST00000589823 C10orf62Q5T681 223 aaPredicted RBP13.01□□□□□ -0.33
VMP1-210ENST00000589823 FRG2Q64ET8 278 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 TLDC1Q6P9B6 456 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 TMEM126BQ8IUX1 230 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 LSMEM2Q8N112 164 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 LRRC8CQ8TDW0 803 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 ZNF75CPQ92670 426 aaPredicted RBP13.01□□□□□ -0.33
VMP1-210ENST00000589823 ZNF285Q96NJ3 590 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 TEFMQ96QE5 360 aaKnown RBP13.01□□□□□ -0.33
VMP1-210ENST00000589823 FRG2BQ96QU4 278 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 DDA1Q9BW61 102 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 ASPSCR1Q9BZE9 553 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 SPRTNQ9H040 489 aaPredicted RBP13.01□□□□□ -0.33
VMP1-210ENST00000589823 RHBGQ9H310 441 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 APMAPQ9HDC9 416 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 KLK13Q9UKR3 277 aa13.01□□□□□ -0.33
VMP1-210ENST00000589823 ADAMTS20P59510 1910 aa13□□□□□ -0.33
VMP1-210ENST00000589823 A0A1W2PNU3 283 aaPredicted RBP13□□□□□ -0.33
VMP1-210ENST00000589823 KLF11O14901 512 aa13□□□□□ -0.33
VMP1-210ENST00000589823 ITM2AO43736 263 aa13□□□□□ -0.33
VMP1-210ENST00000589823 CLEC3AO75596 197 aa13□□□□□ -0.33
VMP1-210ENST00000589823 LYPLA1O75608 230 aaPredicted RBP13□□□□□ -0.33
VMP1-210ENST00000589823 TNFSF15O95150 251 aa13□□□□□ -0.33
VMP1-210ENST00000589823 CHEK2O96017 543 aa13□□□□□ -0.33
VMP1-210ENST00000589823 STATHP02808 62 aa13□□□□□ -0.33
VMP1-210ENST00000589823 UROSP10746 265 aa13□□□□□ -0.33
VMP1-210ENST00000589823 PIK3CBP42338 1070 aa13□□□□□ -0.33
VMP1-210ENST00000589823 NDUFA9Q16795 377 aa13□□□□□ -0.33
VMP1-210ENST00000589823 SH2D4BQ5SQS7 431 aa13□□□□□ -0.33
VMP1-210ENST00000589823 MANEAQ5SRI9 462 aa13□□□□□ -0.33
VMP1-210ENST00000589823 CES4AQ5XG92 561 aa13□□□□□ -0.33
VMP1-210ENST00000589823 VN1R4Q7Z5H5 301 aa13□□□□□ -0.33
VMP1-210ENST00000589823 KIRREL3Q8IZU9 778 aa13□□□□□ -0.33
VMP1-210ENST00000589823 AFAP1L2Q8N4X5 818 aa13□□□□□ -0.33
VMP1-210ENST00000589823 WDR20Q8TBZ3 569 aa13□□□□□ -0.33
VMP1-210ENST00000589823 NT5CQ8TCD5 201 aa13□□□□□ -0.33
VMP1-210ENST00000589823 CKAP2Q8WWK9 683 aa13□□□□□ -0.33
VMP1-210ENST00000589823 SELENOMQ8WWX9 145 aa13□□□□□ -0.33
VMP1-210ENST00000589823 USP7Q93009 1102 aa13□□□□□ -0.33
VMP1-210ENST00000589823 MTFMTQ96DP5 389 aaKnown RBP13□□□□□ -0.33
VMP1-210ENST00000589823 TM4SF19Q96DZ7 209 aa13□□□□□ -0.33
VMP1-210ENST00000589823 NDC1Q9BTX1 674 aa13□□□□□ -0.33
VMP1-210ENST00000589823 SCNM1Q9BWG6 230 aa13□□□□□ -0.33
VMP1-210ENST00000589823 NRSN2Q9GZP1 204 aa13□□□□□ -0.33
VMP1-210ENST00000589823 STARD5Q9NSY2 213 aa13□□□□□ -0.33
VMP1-210ENST00000589823 THAP1Q9NVV9 213 aa13□□□□□ -0.33
VMP1-210ENST00000589823 TSC22D4Q9Y3Q8 395 aa13□□□□□ -0.33
VMP1-210ENST00000589823 TIMM22Q9Y584 194 aa13□□□□□ -0.33
VMP1-210ENST00000589823 HEATR5BQ9P2D3 2071 aa13□□□□□ -0.33
VMP1-210ENST00000589823 PTPRBP23467 1997 aa13□□□□□ -0.33
VMP1-210ENST00000589823 PMS2P1A4D2B8 440 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 FITM1A5D6W6 292 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 URADA6NGE7 173 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 FOXE1O00358 373 aaPredicted RBP12.99□□□□□ -0.33
VMP1-210ENST00000589823 MANBAO00462 879 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 AZIN1O14977 448 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 ZNF749O43361 778 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 ULK1O75385 1050 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 SCRG1O75711 98 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 CTSBP07858 339 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 SERPINA6P08185 405 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 ADRB1P08588 477 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 HBQ1P09105 142 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 SPINK2P20155 84 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 ARRB2P32121 409 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 ARSFP54793 590 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 STXBP1P61764 594 aaKnown RBP12.99□□□□□ -0.33
VMP1-210ENST00000589823 HKDC1Q2TB90 917 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 PRTGQ2VWP7 1150 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 FAM214AQ32MH5 1076 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 SGO1Q5FBB7 561 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 GARNL3Q5VVW2 1013 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 PWWP2BQ6NUJ5 590 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 CLYBLQ8N0X4 340 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 HUS1BQ8NHY5 278 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 AGR3Q8TD06 166 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 CREB3L4Q8TEY5 395 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 ZNF473Q8WTR7 871 aaKnown RBP12.99□□□□□ -0.33
VMP1-210ENST00000589823 NXPE2Q96DL1 559 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 CMTM7Q96FZ5 175 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 PRR11Q96HE9 360 aaPredicted RBP12.99□□□□□ -0.33
VMP1-210ENST00000589823 MAGEB18Q96M61 343 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 KCNA7Q96RP8 456 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 MTERF1Q99551 399 aaKnown RBP12.99□□□□□ -0.33
VMP1-210ENST00000589823 CENPKQ9BS16 269 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 B3GNT4Q9C0J1 378 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 ILKAPQ9H0C8 392 aaPredicted RBP12.99□□□□□ -0.33
VMP1-210ENST00000589823 SYNPO2LQ9H987 977 aa12.99□□□□□ -0.33
VMP1-210ENST00000589823 TXLNGQ9NUQ3 528 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms