RNA–Protein interactions for RNA: ENST00000588259.5

TMED1-203, Transcript of transmembrane p24 trafficking protein 1, humanhuman

TSL 5

Gene TMED1, Length 616 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED1-203ENST00000588259 NAT8LQ8N9F0 302 aa16■□□□□ 0.15
TMED1-203ENST00000588259 KCT2Q8NC54 265 aa16■□□□□ 0.15
TMED1-203ENST00000588259 MARVELD3Q96A59 401 aa16■□□□□ 0.15
TMED1-203ENST00000588259 THAP11Q96EK4 314 aa16■□□□□ 0.15
TMED1-203ENST00000588259 SIGLEC10Q96LC7 697 aa16■□□□□ 0.15
TMED1-203ENST00000588259 IMMP1LQ96LU5 166 aa16■□□□□ 0.15
TMED1-203ENST00000588259 RNF32Q9H0A6 362 aa16■□□□□ 0.15
TMED1-203ENST00000588259 KCNK13Q9HB14 408 aa16■□□□□ 0.15
TMED1-203ENST00000588259 PARVBQ9HBI1 364 aa16■□□□□ 0.15
TMED1-203ENST00000588259 PPANQ9NQ55 473 aaKnown RBP16■□□□□ 0.15
TMED1-203ENST00000588259 ABI3Q9P2A4 366 aa16■□□□□ 0.15
TMED1-203ENST00000588259 SEC14L3Q9UDX4 400 aa16■□□□□ 0.15
TMED1-203ENST00000588259 ABCA12Q86UK0 2595 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 KCNE1BA0A087WTH5 132 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 HNRNPRO43390 633 aaKnown RBP15.99■□□□□ 0.15
TMED1-203ENST00000588259 BANF1O75531 89 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 SERPIND1P05546 499 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 HIST1H2AGP0C0S8 130 aaPredicted RBP15.99■□□□□ 0.15
TMED1-203ENST00000588259 HIST1H2ADP20671 130 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 CCND1P24385 295 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 AGTR2P50052 363 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 ST13P50502 369 aaKnown RBP15.99■□□□□ 0.15
TMED1-203ENST00000588259 ACTN3Q08043 901 aaPredicted RBP15.99■□□□□ 0.15
TMED1-203ENST00000588259 ABRAXAS2Q15018 415 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 CYP1B1Q16678 543 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 RBM20Q5T481 1227 aaKnown RBP15.99■□□□□ 0.15
TMED1-203ENST00000588259 PLAG1Q6DJT9 500 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 CAPN13Q6MZZ7 669 aaPredicted RBP15.99■□□□□ 0.15
TMED1-203ENST00000588259 PAQR3Q6TCH7 311 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 ANKRD37Q7Z713 158 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 SLC26A11Q86WA9 606 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 SHISA5Q8N114 240 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 SLC34A3Q8N130 599 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 BEST3Q8N1M1 668 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 C2CD4AQ8NCU7 369 aaPredicted RBP15.99■□□□□ 0.15
TMED1-203ENST00000588259 SLC13A3Q8WWT9 602 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 HIST1H2AHQ96KK5 128 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 HIST1H2AJQ99878 128 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 H2AFJQ9BTM1 129 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 ARL15Q9NXU5 204 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 NAALAD2Q9Y3Q0 740 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 NEU2Q9Y3R4 380 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 PCNX1Q96RV3 2341 aa15.99■□□□□ 0.15
TMED1-203ENST00000588259 FAM227AF5H4B4 570 aa15.98■□□□□ 0.15
TMED1-203ENST00000588259 NDUFS4O43181 175 aa15.98■□□□□ 0.15
TMED1-203ENST00000588259 CYC1P08574 325 aa15.98■□□□□ 0.15
TMED1-203ENST00000588259 MST1P26927 711 aa15.98■□□□□ 0.15
TMED1-203ENST00000588259 CDKN2DP55273 166 aa15.98■□□□□ 0.15
TMED1-203ENST00000588259 MEF2AQ02078 507 aaPredicted RBP15.98■□□□□ 0.15
TMED1-203ENST00000588259 RBPJQ06330 500 aa15.98■□□□□ 0.15
TMED1-203ENST00000588259 PDAP1Q13442 181 aaKnown RBP15.98■□□□□ 0.15
TMED1-203ENST00000588259 PHKG1Q16816 387 aa15.98■□□□□ 0.15
TMED1-203ENST00000588259 ZNF766Q5HY98 468 aa15.98■□□□□ 0.15
TMED1-203ENST00000588259 ACER2Q5QJU3 275 aa15.98■□□□□ 0.15
TMED1-203ENST00000588259 GPATCH11Q8N954 259 aa15.98■□□□□ 0.15
TMED1-203ENST00000588259 PEX11GQ96HA9 241 aa15.98■□□□□ 0.15
TMED1-203ENST00000588259 ZNF354BQ96LW1 612 aa15.98■□□□□ 0.15
TMED1-203ENST00000588259 HAUS8Q9BT25 410 aa15.98■□□□□ 0.15
TMED1-203ENST00000588259 KLHL1Q9NR64 748 aa15.98■□□□□ 0.15
TMED1-203ENST00000588259 ANKRD10Q9NXR5 420 aa15.98■□□□□ 0.15
TMED1-203ENST00000588259 SLC17A6Q9P2U8 582 aa15.98■□□□□ 0.15
TMED1-203ENST00000588259 ENTPD4Q9Y227 616 aa15.98■□□□□ 0.15
TMED1-203ENST00000588259 CCL21O00585 134 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 SLC16A5O15375 505 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 OR1F1O43749 312 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 TTC4O95801 387 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 FNTAP49354 379 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 CCR8P51685 355 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 CASP6P55212 293 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 DHX9Q08211 1270 aaKnown RBP15.97■□□□□ 0.15
TMED1-203ENST00000588259 NSDHLQ15738 373 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 EXT1Q16394 746 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 BBS9Q3SYG4 887 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 SFT2D3Q587I9 215 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 SPANXN3Q5MJ09 141 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 RNASEH2BQ5TBB1 312 aaKnown RBP15.97■□□□□ 0.15
TMED1-203ENST00000588259 PAPD4Q6PIY7 484 aaKnown RBP15.97■□□□□ 0.15
TMED1-203ENST00000588259 LCTLQ6UWM7 567 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 PDSS2Q86YH6 399 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 TBC1D19Q8N5T2 526 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 MFSD9Q8NBP5 474 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 DNAJB8Q8NHS0 232 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 RELTQ969Z4 430 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 PYCR2Q96C36 320 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 CFAP36Q96G28 342 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 OSBPL9Q96SU4 736 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 UTP23Q9BRU9 249 aaKnown RBP15.97■□□□□ 0.15
TMED1-203ENST00000588259 SGPP1Q9BX95 441 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 TRIM54Q9BYV2 358 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 FAM129AQ9BZQ8 928 aa15.97■□□□□ 0.15
TMED1-203ENST00000588259 TTI1O43156 1089 aa15.96■□□□□ 0.15
TMED1-203ENST00000588259 LCMT2O60294 686 aaKnown RBP15.96■□□□□ 0.15
TMED1-203ENST00000588259 GUCA1CO95843 209 aa15.96■□□□□ 0.15
TMED1-203ENST00000588259 TNFRSF8P28908 595 aa15.96■□□□□ 0.15
TMED1-203ENST00000588259 TAS2R50P59544 299 aa15.96■□□□□ 0.15
TMED1-203ENST00000588259 IL2P60568 153 aa15.96■□□□□ 0.15
TMED1-203ENST00000588259 TIAL1Q01085 375 aaKnown RBP eCLIP15.96■□□□□ 0.15
TMED1-203ENST00000588259 OC90Q02509 493 aaPredicted RBP15.96■□□□□ 0.15
TMED1-203ENST00000588259 HERC3Q15034 1050 aa15.96■□□□□ 0.15
TMED1-203ENST00000588259 HP1BP3Q5SSJ5 553 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms