RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 PLPP5Q8NEB5 264 aa13.25□□□□□ -0.29
DNMT1-213ENST00000587604 MAIP1Q8WWC4 291 aa13.25□□□□□ -0.29
DNMT1-213ENST00000587604 TM4SF19Q96DZ7 209 aa13.25□□□□□ -0.29
DNMT1-213ENST00000587604 MACROD1Q9BQ69 325 aa13.25□□□□□ -0.29
DNMT1-213ENST00000587604 FAM129AQ9BZQ8 928 aa13.25□□□□□ -0.29
DNMT1-213ENST00000587604 PCBD2Q9H0N5 130 aa13.25□□□□□ -0.29
DNMT1-213ENST00000587604 RBSNQ9H1K0 784 aa13.25□□□□□ -0.29
DNMT1-213ENST00000587604 CCDC68Q9H2F9 335 aa13.25□□□□□ -0.29
DNMT1-213ENST00000587604 ANKHQ9HCJ1 492 aa13.25□□□□□ -0.29
DNMT1-213ENST00000587604 KLHL1Q9NR64 748 aa13.25□□□□□ -0.29
DNMT1-213ENST00000587604 ANKRD10Q9NXR5 420 aa13.25□□□□□ -0.29
DNMT1-213ENST00000587604 HCN3Q9P1Z3 774 aa13.25□□□□□ -0.29
DNMT1-213ENST00000587604 MEMO1Q9Y316 297 aa13.25□□□□□ -0.29
DNMT1-213ENST00000587604 ZFHX3Q15911 3703 aa13.25□□□□□ -0.29
DNMT1-213ENST00000587604 SPG11Q96JI7 2443 aa13.25□□□□□ -0.29
DNMT1-213ENST00000587604 FAM237BA0A1B0GVD1 139 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 NPIPA5E9PKD4 350 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 SGK494L7N484 410 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 CDK2AP1O14519 115 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 CLDN14O95500 239 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 FGGP02679 453 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 IL10P22301 178 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 SSTR2P30874 369 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 MAGEA6P43360 314 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 CSNK1G2P78368 415 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 CTBP1Q13363 440 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 THOC5Q13769 683 aaKnown RBP13.24□□□□□ -0.29
DNMT1-213ENST00000587604 NSDHLQ15738 373 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 ZNF549Q6P9A3 640 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 UBE2R2Q712K3 238 aaPredicted RBP13.24□□□□□ -0.29
DNMT1-213ENST00000587604 CAND1Q86VP6 1230 aaKnown RBP13.24□□□□□ -0.29
DNMT1-213ENST00000587604 DENND6AQ8IWF6 608 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 SLC5A8Q8N695 610 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 HORMAD2Q8N7B1 307 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 TMEM178AQ8NBL3 297 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 MTFMTQ96DP5 389 aaKnown RBP13.24□□□□□ -0.29
DNMT1-213ENST00000587604 LPAR4Q99677 370 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 NPAS2Q99743 824 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 HES7Q9BYE0 225 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 GPAMQ9HCL2 828 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 CCDC177Q9NQR7 707 aaPredicted RBP13.24□□□□□ -0.29
DNMT1-213ENST00000587604 HOMER3Q9NSC5 361 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 SAMD15Q9P1V8 674 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 NPIPA1Q9UND3 350 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 COMMD10Q9Y6G5 202 aa13.24□□□□□ -0.29
DNMT1-213ENST00000587604 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-213ENST00000587604 SDR42E2A6NKP2 422 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 GABRR3A8MPY1 467 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 C19orf84I3L1E1 186 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 EIF3FO00303 357 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-213ENST00000587604 ASNA1O43681 348 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 MAN1A2O60476 641 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 TBPL1P62380 186 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 OC90Q02509 493 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-213ENST00000587604 ACTN3Q08043 901 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-213ENST00000587604 ABRAXAS2Q15018 415 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 CDSNQ15517 529 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 SFT2D3Q587I9 215 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 PAPD4Q6PIY7 484 aaKnown RBP13.23□□□□□ -0.29
DNMT1-213ENST00000587604 ASPGQ86U10 573 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 PDSS2Q86YH6 399 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 SPNS2Q8IVW8 549 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 LGI4Q8N135 537 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 KCT2Q8NC54 265 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 FAM98AQ8NCA5 519 aaKnown RBP13.23□□□□□ -0.29
DNMT1-213ENST00000587604 CD200R1Q8TD46 325 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 SLC13A3Q8WWT9 602 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 ZNF669Q96BR6 464 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-213ENST00000587604 CCDC138Q96M89 665 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 FRMD6Q96NE9 622 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 OR1F2PQ96R84 312 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 GPR21Q99679 349 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 TSPAN10Q9H1Z9 355 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-213ENST00000587604 FBXO6Q9NRD1 293 aaPredicted RBP13.23□□□□□ -0.29
DNMT1-213ENST00000587604 SLC22A7Q9Y694 548 aa13.23□□□□□ -0.29
DNMT1-213ENST00000587604 ZCWPW2A0A1B0GU75 182 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 FEZF1A0PJY2 475 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 MAGEB17A8MXT2 336 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 LCMT2O60294 686 aaKnown RBP13.22□□□□□ -0.29
DNMT1-213ENST00000587604 RDH16O75452 317 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 NEURL1O76050 574 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 SP1P08047 785 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 F7P08709 466 aaPredicted RBP13.22□□□□□ -0.29
DNMT1-213ENST00000587604 MLNP12872 115 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 CAPN3P20807 821 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 GRK3P35626 688 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 KIR3DL1P43629 444 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 ST13P50502 369 aaKnown RBP13.22□□□□□ -0.29
DNMT1-213ENST00000587604 TERF1P54274 439 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 TAS2R50P59544 299 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 RHAGQ02094 409 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 USP10Q14694 798 aaKnown RBP13.22□□□□□ -0.29
DNMT1-213ENST00000587604 TRIP13Q15645 432 aaPredicted RBP13.22□□□□□ -0.29
DNMT1-213ENST00000587604 KCTD19Q17RG1 926 aaPredicted RBP13.22□□□□□ -0.29
DNMT1-213ENST00000587604 SLC25A25Q6KCM7 469 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 CAPN13Q6MZZ7 669 aaPredicted RBP13.22□□□□□ -0.29
DNMT1-213ENST00000587604 PIWIL4Q7Z3Z4 852 aaKnown RBP13.22□□□□□ -0.29
DNMT1-213ENST00000587604 GALNTL5Q7Z4T8 443 aa13.22□□□□□ -0.29
DNMT1-213ENST00000587604 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.22□□□□□ -0.29
DNMT1-213ENST00000587604 SLC26A11Q86WA9 606 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms