RNA–Protein interactions for RNA: ENST00000587327.5

PRKCSH-205, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PRKCSH, Length 2,189 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-205ENST00000587327 DCSTAMPQ9H295 470 aa16.27■□□□□ 0.19
PRKCSH-205ENST00000587327 RUBCNLQ9H714 662 aa16.27■□□□□ 0.19
PRKCSH-205ENST00000587327 MRPL17Q9NRX2 175 aaKnown RBP16.27■□□□□ 0.19
PRKCSH-205ENST00000587327 ADPRHL2Q9NX46 363 aa16.27■□□□□ 0.19
PRKCSH-205ENST00000587327 C1orf226A1L170 272 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 TRIM43BA6NCK2 446 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 GABRR3A8MPY1 467 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 TMEM229AB2RXF0 380 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 SCAMP2O15127 329 aaKnown RBP16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 ITGB8P26012 769 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 CD40LGP29965 261 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 RRM2P31350 389 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 CTSOP43234 321 aaPredicted RBP16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 SPINT3P49223 89 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 ELP6Q0PNE2 266 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 SYT16Q17RD7 645 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 GAREM2Q75VX8 874 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 DOHHQ9BU89 302 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 CRISPLD2Q9H0B8 497 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 ZBTB20Q9HC78 741 aaPredicted RBP16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 PSORS1C1Q9UIG5 152 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 BTNL2Q9UIR0 455 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 AP1M2Q9Y6Q5 423 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 DENND4CQ5VZ89 1909 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 NRG2O14511 850 aaPredicted RBP16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 KPNA5O15131 536 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 LILRB3O75022 631 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 VIPP01282 170 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 C1SP09871 688 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 AQP1P29972 269 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 C21orf33P30042 268 aaPredicted RBP16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 UGT2B10P36537 528 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 CLK1P49759 484 aaKnown RBP16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 WDR5P61964 334 aaKnown RBP16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 DDX39BQ13838 428 aaKnown RBP16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 KCNC3Q14003 757 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 RGNQ15493 299 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 CPTPQ5TA50 214 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 MLIPQ5VWP3 458 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 Q6ZPB1 254 aaPredicted RBP16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 SLC22A16Q86VW1 577 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 BBS7Q8IWZ6 715 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 VPS37AQ8NEZ2 397 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 MAL2Q969L2 176 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 METTL2AQ96IZ6 378 aaKnown RBP16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 DACH2Q96NX9 599 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 KCNC2Q96PR1 638 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 MMP27Q9H306 513 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 PLCXD1Q9NUJ7 323 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 SCHIP1Q9P0W5 487 aaPredicted RBP16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 LSM7Q9UK45 103 aaKnown RBP16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 CORO2BQ9UQ03 480 aa16.26■□□□□ 0.19
PRKCSH-205ENST00000587327 E7EQ34 232 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 AIREO43918 545 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 MTX2O75431 263 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 RFPL2O75678 378 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 MYO1DO94832 1006 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 ABCB1P08183 1280 aaPredicted RBP16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 CLTBP09497 229 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 PPIBP23284 216 aaKnown RBP16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 GABRR2P28476 465 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 DOC2AQ14183 400 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 TBCEQ15813 527 aaPredicted RBP16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 ZNF404Q494X3 552 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 MPPE1Q53F39 396 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 PRSS36Q5K4E3 855 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 TSEN54Q7Z6J9 526 aaKnown RBP16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 THOC6Q86W42 341 aaKnown RBP16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 LACC1Q8IV20 430 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 RASGRP3Q8IV61 690 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 PSMA8Q8TAA3 256 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 ABHD8Q96I13 439 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 FEVQ99581 238 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 CEP44Q9C0F1 390 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 BRD9Q9H8M2 597 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 POLE4Q9NR33 117 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 TMEM184CQ9NVA4 438 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 CD84Q9UIB8 345 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 VPS4AQ9UN37 437 aa16.25■□□□□ 0.19
PRKCSH-205ENST00000587327 M0R082 166 aa16.24■□□□□ 0.19
PRKCSH-205ENST00000587327 KDM1AO60341 852 aa16.24■□□□□ 0.19
PRKCSH-205ENST00000587327 GGT2P36268 569 aa16.24■□□□□ 0.19
PRKCSH-205ENST00000587327 EIF2DP41214 584 aaKnown RBP16.24■□□□□ 0.19
PRKCSH-205ENST00000587327 PXNP49023 591 aaPredicted RBP16.24■□□□□ 0.19
PRKCSH-205ENST00000587327 SELENOWP63302 87 aa16.24■□□□□ 0.19
PRKCSH-205ENST00000587327 MAPK11Q15759 364 aa16.24■□□□□ 0.19
PRKCSH-205ENST00000587327 HTR3DQ70Z44 454 aa16.24■□□□□ 0.19
PRKCSH-205ENST00000587327 DSG4Q86SJ6 1040 aa16.24■□□□□ 0.19
PRKCSH-205ENST00000587327 TMC8Q8IU68 726 aa16.24■□□□□ 0.19
PRKCSH-205ENST00000587327 NAGSQ8N159 534 aa16.24■□□□□ 0.19
PRKCSH-205ENST00000587327 CPXM2Q8N436 756 aa16.24■□□□□ 0.19
PRKCSH-205ENST00000587327 ELMO1Q92556 727 aa16.24■□□□□ 0.19
PRKCSH-205ENST00000587327 PROX1Q92786 737 aa16.24■□□□□ 0.19
PRKCSH-205ENST00000587327 MYDGFQ969H8 173 aa16.24■□□□□ 0.19
PRKCSH-205ENST00000587327 HEPHQ9BQS7 1158 aa16.24■□□□□ 0.19
PRKCSH-205ENST00000587327 NDUFAF4Q9P032 175 aa16.24■□□□□ 0.19
PRKCSH-205ENST00000587327 LYVE1Q9Y5Y7 322 aa16.24■□□□□ 0.19
PRKCSH-205ENST00000587327 MKI67P46013 3256 aaKnown RBP16.24■□□□□ 0.19
PRKCSH-205ENST00000587327 PTPRSQ13332 1948 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms