RNA–Protein interactions for RNA: ENST00000587259.5

VMP1-204, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-204ENST00000587259 NAPRTQ6XQN6 538 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 TMEM26Q6ZUK4 368 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 CUZD1Q86UP6 607 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 PLXDC1Q8IUK5 500 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 TRIM48Q8IWZ4 208 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 CPNE9Q8IYJ1 553 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 PTGR2Q8N8N7 351 aaPredicted RBP7.54□□□□□ -1.2
VMP1-204ENST00000587259 SIDT2Q8NBJ9 832 aaKnown RBP7.54□□□□□ -1.2
VMP1-204ENST00000587259 PDPRQ8NCN5 879 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 GPR26Q8NDV2 337 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 SSC4DQ8WTU2 575 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 ASZ1Q8WWH4 475 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 PTERQ96BW5 349 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 C19orf60Q96EN9 201 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 THOC1Q96FV9 657 aaKnown RBP7.54□□□□□ -1.2
VMP1-204ENST00000587259 NSL1Q96IY1 281 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 PPM1MQ96MI6 270 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 NRTNQ99748 197 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 C20orf27Q9GZN8 174 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 C1orf21Q9H246 121 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 TRIT1Q9H3H1 467 aaKnown RBP7.54□□□□□ -1.2
VMP1-204ENST00000587259 ZNF768Q9H5H4 540 aaKnown RBP7.54□□□□□ -1.2
VMP1-204ENST00000587259 COG4Q9H9E3 785 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 LHX9Q9NQ69 397 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 NDE1Q9NXR1 346 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 MAP10Q9P2G4 905 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 TMPRSS11EQ9UL52 423 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 MED16Q9Y2X0 877 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 OARD1Q9Y530 152 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 SHANK1Q9Y566 2161 aa7.54□□□□□ -1.2
VMP1-204ENST00000587259 MED13Q9UHV7 2174 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 KIR2DS5A0A0G2JLQ3 304 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 A0A0G2JNG1 304 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 NPEPPSL1A6NEC2 478 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 A6NL46 340 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 GPR89AB7ZAQ6 455 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 KIR2DS3K7RE56 304 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 UBXN8O00124 270 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 MASP2O00187 686 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 CRCPO75575 148 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 TSPAN12O95859 305 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 VIPP01282 170 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 CHRNGP07510 517 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 FGF4P08620 206 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 RPS17P08708 135 aaKnown RBP7.53□□□□□ -1.2
VMP1-204ENST00000587259 HIST1H2AGP0C0S8 130 aaPredicted RBP7.53□□□□□ -1.2
VMP1-204ENST00000587259 ANKRD34CP0C6C1 535 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 GPR89BP0CG08 455 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 PRSS56P0CW18 603 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 HIST1H2ADP20671 130 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 CDKN1CP49918 316 aaPredicted RBP7.53□□□□□ -1.2
VMP1-204ENST00000587259 HNMTP50135 292 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 PKNOX1P55347 436 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 AP1S2P56377 157 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 NCALDP61601 193 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 TIAL1Q01085 375 aaKnown RBP eCLIP7.53□□□□□ -1.2
VMP1-204ENST00000587259 TUBB3Q13509 450 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 GTF2H3Q13889 308 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 MAP7Q14244 749 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 KIR2DS5Q14953 304 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 TGFBIQ15582 683 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 OR4D1Q15615 310 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 TSNQ15631 228 aaKnown RBP7.53□□□□□ -1.2
VMP1-204ENST00000587259 GPR19Q15760 415 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 PFKFB4Q16877 469 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 GPRC6AQ5T6X5 926 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 CES4AQ5XG92 561 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 SULT1C3Q6IMI6 304 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 ASRGL1Q7L266 308 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 ZNF547Q8IVP9 402 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 CLYBLQ8N0X4 340 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 Q8NA96 180 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 SLC38A9Q8NBW4 561 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 CEP70Q8NHQ1 597 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 PRR7Q8TB68 274 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 ACTRT2Q8TDY3 377 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 UBTD2Q8WUN7 234 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 EXT2Q93063 718 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 GLYATL1Q969I3 302 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 SH3KBP1Q96B97 665 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 PHF21BQ96EK2 531 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 TCTN2Q96GX1 697 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 MAELQ96JY0 434 aaKnown RBP7.53□□□□□ -1.2
VMP1-204ENST00000587259 HIST1H2AHQ96KK5 128 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 HIST1H2AJQ99878 128 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 H2AFJQ9BTM1 129 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 LDHAL6BQ9BYZ2 381 aaPredicted RBP7.53□□□□□ -1.2
VMP1-204ENST00000587259 NMUR2Q9GZQ4 415 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 GSTO2Q9H4Y5 243 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 PNPOQ9NVS9 261 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 CD274Q9NZQ7 290 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 TAGLN3Q9UI15 199 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 PSMD13Q9UNM6 376 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 MAP4K5Q9Y4K4 846 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 CFAP20Q9Y6A4 193 aaKnown RBP7.53□□□□□ -1.2
VMP1-204ENST00000587259 PCSK5Q92824 1860 aa7.53□□□□□ -1.2
VMP1-204ENST00000587259 PRRC2CQ9Y520 2896 aaKnown RBP7.53□□□□□ -1.2
VMP1-204ENST00000587259 CAPN14A8MX76 684 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 ZNF195O14628 629 aa7.52□□□□□ -1.21
VMP1-204ENST00000587259 GYG2O15488 501 aa7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms