RNA–Protein interactions for RNA: ENST00000585121.5

SS18-225, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,545 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-225ENST00000585121 CYC1P08574 325 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 ICAM2P13598 275 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 STMN1P16949 149 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 IL1RNP18510 177 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 STX2P32856 288 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 MAGEA4P43358 317 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 EEF1A2Q05639 463 aaKnown RBP11.73□□□□□ -0.53
SS18-225ENST00000585121 PWP1Q13610 501 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 PPP1R3AQ16821 1122 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 SYT16Q17RD7 645 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 MINDY4Q4G0A6 757 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 GRTP1Q5TC63 336 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 C8orf74Q6P047 294 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 ZNF572Q7Z3I7 529 aaPredicted RBP11.73□□□□□ -0.53
SS18-225ENST00000585121 ZC3H7AQ8IWR0 971 aaKnown RBP11.73□□□□□ -0.53
SS18-225ENST00000585121 OR4K1Q8NGD4 311 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 OR51Q1Q8NH59 317 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 ZCCHC10Q8TBK6 192 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 FBXO25Q8TCJ0 367 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 ZNF592Q92610 1267 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 NEIL2Q969S2 332 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 OR4K3Q96R72 315 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 MACROD1Q9BQ69 325 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 SARGQ9BW04 601 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 DERL2Q9GZP9 239 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 PELI2Q9HAT8 420 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 SMYD2Q9NRG4 433 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 LUZP4Q9P127 313 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 C19orf25Q9UFG5 118 aaPredicted RBP11.73□□□□□ -0.53
SS18-225ENST00000585121 MRPS2Q9Y399 296 aaKnown RBP11.73□□□□□ -0.53
SS18-225ENST00000585121 SLC22A7Q9Y694 548 aa11.73□□□□□ -0.53
SS18-225ENST00000585121 TNRC6AQ8NDV7 1962 aaKnown RBP11.72□□□□□ -0.53
SS18-225ENST00000585121 FAM159BA6NKW6 160 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 CXorf49A8MYA2 514 aaPredicted RBP11.72□□□□□ -0.53
SS18-225ENST00000585121 SGK494L7N484 410 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 PIAS1O75925 651 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 WFS1O76024 890 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 URI1O94763 535 aaPredicted RBP11.72□□□□□ -0.53
SS18-225ENST00000585121 BMP10O95393 424 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 C8orf89P0DMQ9 161 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 COX6A1P12074 109 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 IL10P22301 178 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 AHRP35869 848 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 XCR1P46094 333 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 ATP6V0D1P61421 351 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 MEF2AQ02078 507 aaPredicted RBP11.72□□□□□ -0.53
SS18-225ENST00000585121 NAB1Q13506 487 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 UBAP2LQ14157 1087 aaKnown RBP11.72□□□□□ -0.53
SS18-225ENST00000585121 TSNQ15631 228 aaKnown RBP11.72□□□□□ -0.53
SS18-225ENST00000585121 PLEKHN1Q494U1 663 aaPredicted RBP11.72□□□□□ -0.53
SS18-225ENST00000585121 CATSPEREQ5SY80 951 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 NXPE4Q6UWF7 544 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 ISLR2Q6UXK2 745 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 ABHD13Q7L211 337 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 TMPRSS11BQ86T26 416 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 CEP97Q8IW35 865 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 TCAIMQ8N3R3 496 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 KCT2Q8NC54 265 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 TRPV3Q8NET8 790 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 DNAJB14Q8TBM8 379 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 ANKRD49Q8WVL7 239 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 TSNARE1Q96NA8 513 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 RBBP8Q99708 897 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 WDR77Q9BQA1 342 aaPredicted RBP11.72□□□□□ -0.53
SS18-225ENST00000585121 MCMBPQ9BTE3 642 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 CAPS2Q9BXY5 557 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 CNOT10Q9H9A5 744 aaKnown RBP11.72□□□□□ -0.53
SS18-225ENST00000585121 HCN3Q9P1Z3 774 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 ZFP69BQ9UJL9 534 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 IKZF3Q9UKT9 509 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 SLC22A14Q9Y267 594 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 FLNCQ14315 2725 aa11.72□□□□□ -0.53
SS18-225ENST00000585121 SETXQ7Z333 2677 aaKnown RBP11.72□□□□□ -0.53
SS18-225ENST00000585121 IGHV1-45A0A0A0MS14 117 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 NCF1BA6NI72 391 aaPredicted RBP11.71□□□□□ -0.53
SS18-225ENST00000585121 NCF1CA8MVU1 366 aaPredicted RBP11.71□□□□□ -0.53
SS18-225ENST00000585121 KLHL18O94889 574 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 S100BP04271 92 aaPredicted RBP11.71□□□□□ -0.53
SS18-225ENST00000585121 SERPINA7P05543 415 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 CCDC166P0CW27 439 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 NCF1P14598 390 aaPredicted RBP11.71□□□□□ -0.53
SS18-225ENST00000585121 GNAZP19086 355 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 GLRBP48167 497 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 RBBP5Q15291 538 aaKnown RBP11.71□□□□□ -0.53
SS18-225ENST00000585121 WHAMMP3Q1A5X7 153 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 ZXDCQ2QGD7 858 aaPredicted RBP11.71□□□□□ -0.53
SS18-225ENST00000585121 TMEM205Q6UW68 189 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 RIPOR1Q6ZS17 1223 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 Q6ZS92 163 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 CEP128Q6ZU80 1094 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 RAPH1Q70E73 1250 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 GPSM1Q86YR5 675 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 PPM1NQ8N819 430 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 Q8NA96 180 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 PPP4R1Q8TF05 950 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 LMF1Q96S06 567 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 GPR22Q99680 433 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 TUBB6Q9BUF5 446 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 ZNF700Q9H0M5 742 aa11.71□□□□□ -0.53
SS18-225ENST00000585121 CAB39LQ9H9S4 337 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms