RNA–Protein interactions for RNA: ENST00000585042.5

VAPA-209, Transcript of VAMP associated protein A, humanhuman

TSL 4

Gene VAPA, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-209ENST00000585042 SP140Q13342 867 aa14.16□□□□□ -0.14
VAPA-209ENST00000585042 ZNF630Q2M218 657 aaPredicted RBP14.16□□□□□ -0.14
VAPA-209ENST00000585042 MINDY4Q4G0A6 757 aa14.16□□□□□ -0.14
VAPA-209ENST00000585042 ANKRD37Q7Z713 158 aa14.16□□□□□ -0.14
VAPA-209ENST00000585042 MRGPRGQ86SM5 289 aa14.16□□□□□ -0.14
VAPA-209ENST00000585042 MCEMP1Q8IX19 187 aa14.16□□□□□ -0.14
VAPA-209ENST00000585042 LGI4Q8N135 537 aa14.16□□□□□ -0.14
VAPA-209ENST00000585042 RASGEF1CQ8N431 466 aa14.16□□□□□ -0.14
VAPA-209ENST00000585042 HORMAD2Q8N7B1 307 aa14.16□□□□□ -0.14
VAPA-209ENST00000585042 SLC13A3Q8WWT9 602 aa14.16□□□□□ -0.14
VAPA-209ENST00000585042 MAGOHBQ96A72 148 aaKnown RBP14.16□□□□□ -0.14
VAPA-209ENST00000585042 CCDC120Q96HB5 630 aa14.16□□□□□ -0.14
VAPA-209ENST00000585042 SIGLEC10Q96LC7 697 aa14.16□□□□□ -0.14
VAPA-209ENST00000585042 SERPINB12Q96P63 405 aa14.16□□□□□ -0.14
VAPA-209ENST00000585042 NAP1L3Q99457 506 aaPredicted RBP14.16□□□□□ -0.14
VAPA-209ENST00000585042 UNKQ9C0B0 810 aaKnown RBP14.16□□□□□ -0.14
VAPA-209ENST00000585042 CLK4Q9HAZ1 481 aaKnown RBP14.16□□□□□ -0.14
VAPA-209ENST00000585042 ABCF3Q9NUQ8 709 aa14.16□□□□□ -0.14
VAPA-209ENST00000585042 TAS2R13Q9NYV9 303 aa14.16□□□□□ -0.14
VAPA-209ENST00000585042 JRKLQ9Y4A0 524 aa14.16□□□□□ -0.14
VAPA-209ENST00000585042 MAGEB17A8MXT2 336 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 F10P00742 488 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 SLC35G6P0C7Q6 338 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 CXCR5P32302 372 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 VPS41P49754 854 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 TBPL1P62380 186 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 SKP1P63208 163 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 MEF2AQ02078 507 aaPredicted RBP14.15□□□□□ -0.14
VAPA-209ENST00000585042 TUBA3CQ13748 450 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 HERC3Q15034 1050 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 CYP1B1Q16678 543 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 MFSD4BQ5TF39 518 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 CAPN13Q6MZZ7 669 aaPredicted RBP14.15□□□□□ -0.14
VAPA-209ENST00000585042 TTC27Q6P3X3 843 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 TUBA3EQ6PEY2 450 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 AGTRAPQ6RW13 159 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 LCTLQ6UWM7 567 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 ASPGQ86U10 573 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 CPNE9Q8IYJ1 553 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.15□□□□□ -0.141e-12■■■■■ 60.9
VAPA-209ENST00000585042 MDS2Q8NDY4 140 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 PBKQ96KB5 322 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 UTP23Q9BRU9 249 aaKnown RBP14.15□□□□□ -0.14
VAPA-209ENST00000585042 HAUS8Q9BT25 410 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 SGPP1Q9BX95 441 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 KCNK13Q9HB14 408 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 TRMT6Q9UJA5 497 aaKnown RBP14.15□□□□□ -0.14
VAPA-209ENST00000585042 PDE10AQ9Y233 779 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 ZNF835Q9Y2P0 537 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 NEU2Q9Y3R4 380 aa14.15□□□□□ -0.14
VAPA-209ENST00000585042 ASPDHA6ND91 283 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 SGK494L7N484 410 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 LCMT2O60294 686 aaKnown RBP14.14□□□□□ -0.15
VAPA-209ENST00000585042 SLC19A2O60779 497 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 HIST1H2AGP0C0S8 130 aaPredicted RBP14.14□□□□□ -0.15
VAPA-209ENST00000585042 CD46P15529 392 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 NPPBP16860 134 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 IL1RNP18510 177 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 HIST1H2ADP20671 130 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 HTR1EP28566 365 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 COILP38432 576 aaPredicted RBP14.14□□□□□ -0.15
VAPA-209ENST00000585042 CD96P40200 585 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 SMSP52788 366 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 TERF1P54274 439 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 MPP1Q00013 466 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 ACTN3Q08043 901 aaPredicted RBP14.14□□□□□ -0.15
VAPA-209ENST00000585042 PWP1Q13610 501 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 NSDHLQ15738 373 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 HSP90AA5PQ58FG0 334 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 Q6ZPB1 254 aaPredicted RBP14.14□□□□□ -0.15
VAPA-209ENST00000585042 LANCL3Q6ZV70 420 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 PRSS41Q7RTY9 318 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 PIWIL4Q7Z3Z4 852 aaKnown RBP14.14□□□□□ -0.15
VAPA-209ENST00000585042 STRA8Q7Z7C7 330 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 SLC26A11Q86WA9 606 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 BEST3Q8N1M1 668 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 SLC5A8Q8N695 610 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 NAT8LQ8N9F0 302 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 TMEM178AQ8NBL3 297 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 MFSD9Q8NBP5 474 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 KCT2Q8NC54 265 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 C2CD4AQ8NCU7 369 aaPredicted RBP14.14□□□□□ -0.15
VAPA-209ENST00000585042 ABHD11Q8NFV4 315 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 OR4K1Q8NGD4 311 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 EEF1AKMT1Q8WVE0 214 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 SCMH1Q96GD3 660 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 HIST1H2AHQ96KK5 128 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 LPAR4Q99677 370 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 HIST1H2AJQ99878 128 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 H2AFJQ9BTM1 129 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 MAD1L1Q9Y6D9 718 aa14.14□□□□□ -0.15
VAPA-209ENST00000585042 IGHV3-20A0A0C4DH32 117 aa14.13□□□□□ -0.15
VAPA-209ENST00000585042 TTC4O95801 387 aa14.13□□□□□ -0.15
VAPA-209ENST00000585042 EEF1DP29692 281 aaKnown RBP14.13□□□□□ -0.15
VAPA-209ENST00000585042 AP1S2P56377 157 aa14.13□□□□□ -0.15
VAPA-209ENST00000585042 TAS2R50P59544 299 aa14.13□□□□□ -0.15
VAPA-209ENST00000585042 SNRPNP63162 240 aaKnown RBP14.13□□□□□ -0.15
VAPA-209ENST00000585042 RHAGQ02094 409 aa14.13□□□□□ -0.15
VAPA-209ENST00000585042 NAE1Q13564 534 aa14.13□□□□□ -0.15
VAPA-209ENST00000585042 DUPD1Q68J44 220 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms