RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 CDKL4Q5MAI5 379 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 DCAF10Q5QP82 559 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 TEX35Q5T0J7 233 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 ZNF385CQ66K41 422 aaPredicted RBP6.23□□□□□ -1.41
TRAF4-213ENST00000578917 CPZQ66K79 652 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 FAAH2Q6GMR7 532 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 TCTN3Q6NUS6 607 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 MRPL14Q6P1L8 145 aaKnown RBP6.23□□□□□ -1.41
TRAF4-213ENST00000578917 TRMT10CQ7L0Y3 403 aaKnown RBP6.23□□□□□ -1.41
TRAF4-213ENST00000578917 ABHD13Q7L211 337 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 TMPRSS11BQ86T26 416 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 MYLK4Q86YV6 388 aaPredicted RBP6.23□□□□□ -1.41
TRAF4-213ENST00000578917 APLFQ8IW19 511 aaPredicted RBP6.23□□□□□ -1.41
TRAF4-213ENST00000578917 DTWD1Q8N5C7 304 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 KCT2Q8NC54 265 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 ZNF740Q8NDX6 193 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 TRPV3Q8NET8 790 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 ABHD11Q8NFV4 315 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 ESAMQ96AP7 390 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 NACC2Q96BF6 587 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 RHBDF1Q96CC6 855 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 NXNL1Q96CM4 212 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 SCYL1Q96KG9 808 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 UBXN10Q96LJ8 280 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 C10orf90Q96M02 699 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 OR4K3Q96R72 315 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 MCMBPQ9BTE3 642 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 TRIM55Q9BYV6 548 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 SLC26A1Q9H2B4 701 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 RHBGQ9H310 441 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 CDC42EP4Q9H3Q1 356 aaKnown RBP6.23□□□□□ -1.41
TRAF4-213ENST00000578917 ACSS3Q9H6R3 686 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 PELI2Q9HAT8 420 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 SNX15Q9NRS6 342 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 SEMA3GQ9NS98 782 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 SLC22A11Q9NSA0 550 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 GPR83Q9NYM4 423 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 HCN3Q9P1Z3 774 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 MAP10Q9P2G4 905 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 ZFP69BQ9UJL9 534 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 FBXL4Q9UKA2 621 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 SH2B3Q9UQQ2 575 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 TP53TG5Q9Y2B4 290 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 NAALAD2Q9Y3Q0 740 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 MAP4K5Q9Y4K4 846 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 SEC16AO15027 2179 aa6.23□□□□□ -1.41
TRAF4-213ENST00000578917 TTLL8A6PVC2 850 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 IDSB3KWA1 339 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 H0YIG0 161 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 J3QKU1 62 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 PSMD12O00232 456 aaPredicted RBP6.22□□□□□ -1.41
TRAF4-213ENST00000578917 MAP2K7O14733 419 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 P2RX6O15547 441 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 CNOT3O75175 753 aaKnown RBP6.22□□□□□ -1.41
TRAF4-213ENST00000578917 C1QL1O75973 258 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 MED26O95402 600 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 ONECUT2O95948 504 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 C2P06681 752 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 UMODP07911 640 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 SLC35E2BP0CK96 405 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 EPB42P16452 691 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 ALOX12P18054 663 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 IL1RNP18510 177 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 NR1D1P20393 614 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 CNTFP26441 200 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 VARSP26640 1264 aaKnown RBP6.22□□□□□ -1.41
TRAF4-213ENST00000578917 HPDP32754 393 aaPredicted RBP6.22□□□□□ -1.41
TRAF4-213ENST00000578917 AHRP35869 848 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 RAB8AP61006 207 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 STXBP1P61764 594 aaKnown RBP6.22□□□□□ -1.41
TRAF4-213ENST00000578917 MAT1AQ00266 395 aaKnown RBP6.22□□□□□ -1.41
TRAF4-213ENST00000578917 IRF8Q02556 426 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 ACTN3Q08043 901 aaPredicted RBP6.22□□□□□ -1.41
TRAF4-213ENST00000578917 KLRB1Q12918 225 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 CDC16Q13042 620 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 AIMP2Q13155 320 aaKnown RBP6.22□□□□□ -1.41
TRAF4-213ENST00000578917 PWP1Q13610 501 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 SLBPQ14493 270 aaKnown RBP eCLIP6.22□□□□□ -1.41
TRAF4-213ENST00000578917 ZKSCAN8Q15776 578 aaPredicted RBP6.22□□□□□ -1.41
TRAF4-213ENST00000578917 PFKFB4Q16877 469 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 SYT16Q17RD7 645 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 ZXDCQ2QGD7 858 aaPredicted RBP6.22□□□□□ -1.41
TRAF4-213ENST00000578917 TUBB8Q3ZCM7 444 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 DEFB134Q4QY38 66 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 COLEC12Q5KU26 742 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 AGAP7PQ5VUJ5 663 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 TMEM214Q6NUQ4 689 aaKnown RBP6.22□□□□□ -1.41
TRAF4-213ENST00000578917 NIPAL1Q6NVV3 410 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 TMIGD1Q6UXZ0 262 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 SLCO4C1Q6ZQN7 724 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 VN1R4Q7Z5H5 301 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 PPP1R32Q7Z5V6 425 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 ISCA2Q86U28 154 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 LAPTM4BQ86VI4 370 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 RELL1Q8IUW5 271 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 PARP9Q8IXQ6 854 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 GALNT16Q8N428 558 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 TTLQ8NG68 377 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 OR4K1Q8NGD4 311 aa6.22□□□□□ -1.41
TRAF4-213ENST00000578917 OR51Q1Q8NH59 317 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms