RNA–Protein interactions for RNA: ENST00000577901.5

VAPA-204, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 917 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-204ENST00000577901 UAP1Q16222 522 aaPredicted RBP15.23■□□□□ 0.03
VAPA-204ENST00000577901 AGAP7PQ5VUJ5 663 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 IRAK1BP1Q5VVH5 260 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 C1QL3Q5VWW1 255 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 FRMPD2BQ6IN97 320 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 LCTLQ6UWM7 567 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 IGFL2Q6UWQ7 119 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 C17orf64Q86WR6 236 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 OR56A3Q8NH54 315 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 MRRFQ96E11 262 aaKnown RBP15.23■□□□□ 0.03
VAPA-204ENST00000577901 AGAP4Q96P64 663 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 EGFL8Q99944 293 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 RHOXF2Q9BQY4 288 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 FUT8Q9BYC5 575 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 ACSS3Q9H6R3 686 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 WDR54Q9H977 334 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 CUTCQ9NTM9 273 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 IKZF3Q9UKT9 509 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 NFU1Q9UMS0 254 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 HS3ST3B1Q9Y662 390 aa15.23■□□□□ 0.03
VAPA-204ENST00000577901 LOC105369274A0A096LPK9 316 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 LOC102723532A0A0G2JNH3 316 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 H0YGG7 62 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 TXNDC9O14530 226 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 SOCS6O14544 535 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 LRRTM2O43300 516 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 NRP2O60462 931 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 WISP3O95389 354 aaPredicted RBP15.22■□□□□ 0.03
VAPA-204ENST00000577901 ONECUT2O95948 504 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 ALBP02768 609 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 NPPBP16860 134 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 GRK3P35626 688 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 ARF3P61204 181 aaPredicted RBP15.22■□□□□ 0.03
VAPA-204ENST00000577901 TSNQ15631 228 aaKnown RBP15.22■□□□□ 0.03
VAPA-204ENST00000577901 NKG7Q16617 165 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 PPP1R3AQ16821 1122 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 OR4N4Q8N0Y3 316 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 DNAJB14Q8TBM8 379 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 GRHL3Q8TE85 626 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 SPSB2Q99619 263 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 L2HGDHQ9H9P8 463 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 OSGIN2Q9Y236 505 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 IKBKGQ9Y6K9 419 aa15.22■□□□□ 0.03
VAPA-204ENST00000577901 SEC16AO15027 2179 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 CREBBPQ92793 2442 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 E2F3O00716 465 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 DSCR3O14972 297 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 SNRNP200O75643 2136 aaKnown RBP15.21■□□□□ 0.03
VAPA-204ENST00000577901 EDN3P14138 238 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 CD1DP15813 335 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 SLC26A3P40879 764 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 TSFMP43897 325 aaKnown RBP15.21■□□□□ 0.03
VAPA-204ENST00000577901 EMP3P54852 163 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 PER3P56645 1201 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 CDC16Q13042 620 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 CSHL1Q14406 222 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 ZNF169Q14929 603 aaPredicted RBP15.21■□□□□ 0.03
VAPA-204ENST00000577901 KIRREL2Q6UWL6 708 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 SHISA6Q6ZSJ9 500 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 COX15Q7KZN9 410 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 CCDC91Q7Z6B0 441 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 TBC1D1Q86TI0 1168 aaPredicted RBP15.21■□□□□ 0.03
VAPA-204ENST00000577901 PARP9Q8IXQ6 854 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 SLC34A3Q8N130 599 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 SPATA6LQ8N4H0 392 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 CSNK1A1LQ8N752 337 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 ZDHHC19Q8WVZ1 309 aaPredicted RBP15.21■□□□□ 0.03
VAPA-204ENST00000577901 PYCR2Q96C36 320 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 UBXN10Q96LJ8 280 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 OR2A5Q96R48 311 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 SLC26A1Q9H2B4 701 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 SOX17Q9H6I2 414 aaPredicted RBP15.21■□□□□ 0.03
VAPA-204ENST00000577901 NXT1Q9UKK6 140 aaKnown RBP15.21■□□□□ 0.03
VAPA-204ENST00000577901 ACOT9Q9Y305 439 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 DYRK1BQ9Y463 629 aa15.21■□□□□ 0.03
VAPA-204ENST00000577901 CACNA1DQ01668 2161 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 A0A087WUV0 522 aaPredicted RBP15.2■□□□□ 0.02
VAPA-204ENST00000577901 HAT1O14929 419 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 INHBAP08476 426 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 TNFRSF8P28908 595 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 CCR8P51685 355 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 RPS15AP62244 130 aaKnown RBP15.2■□□□□ 0.02
VAPA-204ENST00000577901 CSNK1G2P78368 415 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 TGFBIQ15582 683 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 ZXDCQ2QGD7 858 aaPredicted RBP15.2■□□□□ 0.02
VAPA-204ENST00000577901 MUM1Q2TAK8 710 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 TUBB8Q3ZCM7 444 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 MROH9Q5TGP6 573 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 B3GNTL1Q67FW5 361 aaPredicted RBP15.2■□□□□ 0.02
VAPA-204ENST00000577901 TRMT10CQ7L0Y3 403 aaKnown RBP15.2■□□□□ 0.02
VAPA-204ENST00000577901 TAOK1Q7L7X3 1001 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 CMC1Q7Z7K0 106 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 GPSM1Q86YR5 675 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 SRRM1Q8IYB3 904 aaKnown RBP15.2■□□□□ 0.02
VAPA-204ENST00000577901 TCAIMQ8N3R3 496 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 THAP11Q96EK4 314 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 CABS1Q96KC9 395 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 CNDP1Q96KN2 507 aa15.2■□□□□ 0.02
VAPA-204ENST00000577901 UNKQ9C0B0 810 aaKnown RBP15.2■□□□□ 0.02
VAPA-204ENST00000577901 LHPPQ9H008 270 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms