RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 PTBP2Q9UKA9 531 aaKnown RBP7.55□□□□□ -1.2
CCDC40-215ENST00000576033 MAU2Q9Y6X3 613 aa7.55□□□□□ -1.2
CCDC40-215ENST00000576033 A0A0G2JN53 185 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 PABPN1LA6NDY0 278 aaKnown RBP7.54□□□□□ -1.2
CCDC40-215ENST00000576033 ZNF860A6NHJ4 632 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 A8MT66 165 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 TARM1B6A8C7 271 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 HAX1O00165 279 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 TBX6O95947 436 aaPredicted RBP7.54□□□□□ -1.2
CCDC40-215ENST00000576033 SERPIND1P05546 499 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 CAPN1P07384 714 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 GFAPP14136 432 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 STAT5AP42229 794 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 OR1D4P47884 311 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 MAT1AQ00266 395 aaKnown RBP7.54□□□□□ -1.2
CCDC40-215ENST00000576033 CDKL1Q00532 357 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 REEP5Q00765 189 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 CDC16Q13042 620 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 IL10RAQ13651 578 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 IL11RAQ14626 422 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 PCLAFQ15004 111 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 SETDB1Q15047 1291 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 ACAP2Q15057 778 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 FAM83EQ2M2I3 478 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 CCDC153Q494R4 210 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.54□□□□□ -1.2
CCDC40-215ENST00000576033 TCHHL1Q5QJ38 904 aaPredicted RBP7.54□□□□□ -1.2
CCDC40-215ENST00000576033 TMTC4Q5T4D3 741 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 SLCO4C1Q6ZQN7 724 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 TTLL10Q6ZVT0 673 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 GOLGA7Q7Z5G4 137 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 CCDC91Q7Z6B0 441 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 KLHDC8AQ8IYD2 350 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 NLGN4XQ8N0W4 816 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 TEX9Q8N6V9 391 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 CSNK1A1LQ8N752 337 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 KCT2Q8NC54 265 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 ARMC2Q8NEN0 867 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 NLGN4YQ8NFZ3 816 aaPredicted RBP7.54□□□□□ -1.2
CCDC40-215ENST00000576033 OR52B6Q8NGF0 335 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 UBTD2Q8WUN7 234 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 C10orf82Q8WW14 230 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 CCT6BQ92526 530 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 N4BP2L2Q92802 583 aaPredicted RBP7.54□□□□□ -1.2
CCDC40-215ENST00000576033 SLC22A18Q96BI1 424 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 CLIP3Q96DZ5 547 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 ZNF285Q96NJ3 590 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 TMEM237Q96Q45 408 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 ZFYVE21Q9BQ24 234 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 MECRQ9BV79 373 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 TRIM54Q9BYV2 358 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 CD244Q9BZW8 370 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 FAM107BQ9H098 131 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 KLHL31Q9H511 634 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 FANCEQ9HB96 536 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 DNAJC11Q9NVH1 559 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 GEMIN8Q9NWZ8 242 aaKnown RBP7.54□□□□□ -1.2
CCDC40-215ENST00000576033 KLHL14Q9P2G3 628 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 CTSFQ9UBX1 484 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 NDOR1Q9UHB4 597 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 ACSL6Q9UKU0 697 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 PLCL2Q9UPR0 1127 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 ARL2BPQ9Y2Y0 163 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 PCDHGA4Q9Y5G9 962 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 KLK4Q9Y5K2 254 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 ATRXP46100 2492 aa7.54□□□□□ -1.2
CCDC40-215ENST00000576033 PIEZO2Q9H5I5 2752 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 A0A087WV48 116 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 OR2W5A6NFC9 320 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 ZNF839A8K0R7 811 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.53□□□□□ -1.2
CCDC40-215ENST00000576033 G3V2L1 256 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 E2F3O00716 465 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 OR7A17O14581 309 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 NDUFS4O43181 175 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 OR1F1O43749 312 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 KLK8O60259 260 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 DLX3O60479 287 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 CPNE3O75131 537 aaKnown RBP7.53□□□□□ -1.2
CCDC40-215ENST00000576033 ALOX12BO75342 701 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 KATNA1O75449 491 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 STK16O75716 305 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 CCNDBP1O95273 360 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 S100BP04271 92 aaPredicted RBP7.53□□□□□ -1.2
CCDC40-215ENST00000576033 PRKAR1AP10644 381 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 EZRP15311 586 aaKnown RBP7.53□□□□□ -1.2
CCDC40-215ENST00000576033 IL1RNP18510 177 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 BGNP21810 368 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 GGT5P36269 586 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 DLSTP36957 453 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 HSD17B2P37059 387 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 HNF4AP41235 474 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 CCR8P51685 355 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 CDH13P55290 713 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 CXADRP78310 365 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 OLR1P78380 273 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 HYAL2Q12891 473 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 DOC2AQ14183 400 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 PRTGQ2VWP7 1150 aa7.53□□□□□ -1.2
CCDC40-215ENST00000576033 GALNTL6Q49A17 601 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 88.9 ms