RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 AVPR1BP47901 424 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 CSRP3P50461 194 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 SOX8P57073 446 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 MAT1AQ00266 395 aaKnown RBP12.36□□□□□ -0.43
CNOT1-220ENST00000569916 TLE1Q04724 770 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 DLG1Q12959 904 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 RAPSNQ13702 412 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 BMPR2Q13873 1038 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 CEP128Q6ZU80 1094 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 LAPTM4BQ86VI4 370 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 PDSS2Q86YH6 399 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 ZC3H7AQ8IWR0 971 aaKnown RBP12.36□□□□□ -0.43
CNOT1-220ENST00000569916 SHISA5Q8N114 240 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 GALNT16Q8N428 558 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 OR11G2Q8NGC1 345 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 IFT81Q8WYA0 676 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 KIAA1191Q96A73 305 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 MOCOSQ96EN8 888 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 CYTH2Q99418 400 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 SMAD5Q99717 465 aaKnown RBP12.36□□□□□ -0.43
CNOT1-220ENST00000569916 FUT8Q9BYC5 575 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 TGIF2Q9GZN2 237 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 C3orf18Q9UK00 162 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 G3BP2Q9UN86 482 aaKnown RBP12.36□□□□□ -0.43
CNOT1-220ENST00000569916 ZNF451Q9Y4E5 1061 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 PCDHGB7Q9Y5F8 929 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 KCNE2Q9Y6J6 123 aa12.36□□□□□ -0.43
CNOT1-220ENST00000569916 TENM4Q6N022 2769 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 IDSB3KWA1 339 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 NDUFS4O43181 175 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 CRABP2P29373 138 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 GGT5P36269 586 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 EFNA3P52797 238 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 AIMP2Q13155 320 aaKnown RBP12.35□□□□□ -0.43
CNOT1-220ENST00000569916 MYBPC3Q14896 1274 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 TUBB8Q3ZCM7 444 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 FBXO48Q5FWF7 155 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 CDKL4Q5MAI5 379 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 VWA5B1Q5TIE3 1220 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 NXPE4Q6UWF7 544 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 RAPH1Q70E73 1250 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 GPSM1Q86YR5 675 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 TCAIMQ8N3R3 496 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 TBC1D19Q8N5T2 526 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 CEP112Q8N8E3 955 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 ANKRD53Q8N9V6 530 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 TEX19Q8NA77 164 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 PDPRQ8NCN5 879 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 NT5CQ8TCD5 201 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 MRRFQ96E11 262 aaKnown RBP12.35□□□□□ -0.43
CNOT1-220ENST00000569916 AIF1LQ9BQI0 150 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 YIPF2Q9BWQ6 316 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 TSPYL1Q9H0U9 437 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 ATP13A2Q9NQ11 1180 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 IGSF5Q9NSI5 407 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 WWOXQ9NZC7 414 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 SLC22A7Q9Y694 548 aa12.35□□□□□ -0.43
CNOT1-220ENST00000569916 A0A1W2PQ72 361 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 SGK494L7N484 410 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 RDH16O75452 317 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 JRKO75564 520 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 IPO13O94829 963 aaKnown RBP12.34□□□□□ -0.43
CNOT1-220ENST00000569916 BMP10O95393 424 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 ACSL3O95573 720 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 LTA4HP09960 611 aaKnown RBP12.34□□□□□ -0.43
CNOT1-220ENST00000569916 ACPPP15309 386 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 TFEBP19484 476 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 VARSP26640 1264 aaKnown RBP12.34□□□□□ -0.43
CNOT1-220ENST00000569916 AHRP35869 848 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 KCNC1P48547 511 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 EMP2P54851 167 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 IRF9Q00978 393 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 CDC16Q13042 620 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 PWP1Q13610 501 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 NADK2Q4G0N4 442 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 MROH9Q5TGP6 573 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 ATG9BQ674R7 924 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 SULT1C3Q6IMI6 304 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 TBC1D1Q86TI0 1168 aaPredicted RBP12.34□□□□□ -0.43
CNOT1-220ENST00000569916 ISCA2Q86U28 154 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 HPS6Q86YV9 775 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 CENPLQ8N0S6 344 aaPredicted RBP12.34□□□□□ -0.43
CNOT1-220ENST00000569916 AFAP1L2Q8N4X5 818 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 EXT2Q93063 718 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 ESAMQ96AP7 390 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 C8orf44Q96CB5 159 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 ATOH8Q96SQ7 321 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 ALG9Q9H6U8 611 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 ZNF552Q9H707 407 aaPredicted RBP12.34□□□□□ -0.43
CNOT1-220ENST00000569916 ANKHQ9HCJ1 492 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 SNX15Q9NRS6 342 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 NUDT4Q9NZJ9 180 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 CD274Q9NZQ7 290 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 HCN3Q9P1Z3 774 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 C5AR2Q9P296 337 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 ZFP69BQ9UJL9 534 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 PTBP2Q9UKA9 531 aaKnown RBP12.34□□□□□ -0.43
CNOT1-220ENST00000569916 RNF112Q9ULX5 631 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 NAALAD2Q9Y3Q0 740 aa12.34□□□□□ -0.43
CNOT1-220ENST00000569916 CPAMD8Q8IZJ3 1885 aa12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms