RNA–Protein interactions for RNA: ENST00000569063.5

CLK3-225, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 833 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-225ENST00000569063 DYRK1BQ9Y463 629 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 KCNE2Q9Y6J6 123 aa19.23■□□□□ 0.67
CLK3-225ENST00000569063 ESYT3A0FGR9 886 aa19.22■□□□□ 0.67
CLK3-225ENST00000569063 CCDC166P0CW27 439 aa19.22■□□□□ 0.67
CLK3-225ENST00000569063 COX6A1P12074 109 aa19.22■□□□□ 0.67
CLK3-225ENST00000569063 CXCR2P25025 360 aa19.22■□□□□ 0.67
CLK3-225ENST00000569063 SPRP35270 261 aaPredicted RBP19.22■□□□□ 0.67
CLK3-225ENST00000569063 Q0VFX4 171 aa19.22■□□□□ 0.67
CLK3-225ENST00000569063 TGFBIQ15582 683 aa19.22■□□□□ 0.67
CLK3-225ENST00000569063 IRAK1BP1Q5VVH5 260 aa19.22■□□□□ 0.67
CLK3-225ENST00000569063 FRA10AC1Q70Z53 315 aa19.22■□□□□ 0.67
CLK3-225ENST00000569063 NDUFAF7Q7L592 441 aa19.22■□□□□ 0.67
CLK3-225ENST00000569063 PARP9Q8IXQ6 854 aa19.22■□□□□ 0.67
CLK3-225ENST00000569063 ZNF740Q8NDX6 193 aa19.22■□□□□ 0.67
CLK3-225ENST00000569063 CPT1CQ8TCG5 803 aa19.22■□□□□ 0.67
CLK3-225ENST00000569063 FBF1Q8TES7 1133 aa19.22■□□□□ 0.67
CLK3-225ENST00000569063 RHBDF1Q96CC6 855 aa19.22■□□□□ 0.67
CLK3-225ENST00000569063 UBXN10Q96LJ8 280 aa19.22■□□□□ 0.67
CLK3-225ENST00000569063 TSNARE1Q96NA8 513 aa19.22■□□□□ 0.67
CLK3-225ENST00000569063 PELI2Q9HAT8 420 aa19.22■□□□□ 0.67
CLK3-225ENST00000569063 ZBTB20Q9HC78 741 aaPredicted RBP19.22■□□□□ 0.67
CLK3-225ENST00000569063 SLAMF7Q9NQ25 335 aa19.22■□□□□ 0.67
CLK3-225ENST00000569063 B3GNT3Q9Y2A9 372 aa19.22■□□□□ 0.67
CLK3-225ENST00000569063 UBR5O95071 2799 aaPredicted RBP19.22■□□□□ 0.67
CLK3-225ENST00000569063 LOC102723996A0A087X1L8 192 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 PHGDHO43175 533 aaKnown RBP19.21■□□□□ 0.67
CLK3-225ENST00000569063 NDUFS4O43181 175 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 CYC1P08574 325 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 IL1RNP18510 177 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 AHRP35869 848 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 SCTRP47872 440 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 SLC6A12P48065 614 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 RAB10P61026 200 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 ATP6V0D1P61421 351 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 NAB1Q13506 487 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 PLEKHN1Q494U1 663 aaPredicted RBP19.21■□□□□ 0.67
CLK3-225ENST00000569063 CDKL4Q5MAI5 379 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 AGAP7PQ5VUJ5 663 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 TMEM205Q6UW68 189 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 NXPE4Q6UWF7 544 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 IGFL2Q6UWQ7 119 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 PDSS2Q86YH6 399 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 SPATA6LQ8N4H0 392 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 ZADH2Q8N4Q0 377 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 AFAP1L2Q8N4X5 818 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 PPM1NQ8N819 430 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 OR51Q1Q8NH59 317 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 ZCCHC10Q8TBK6 192 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 NT5CQ8TCD5 201 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 MOCOSQ96EN8 888 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 THOC3Q96J01 351 aaKnown RBP19.21■□□□□ 0.67
CLK3-225ENST00000569063 AGAP4Q96P64 663 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 SPNS1Q9H2V7 528 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 ZNF160Q9HCG1 818 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 ZFP69BQ9UJL9 534 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 MKL2Q9ULH7 1088 aa19.21■□□□□ 0.67
CLK3-225ENST00000569063 IGHV1-45A0A0A0MS14 117 aa19.2■□□□□ 0.66
CLK3-225ENST00000569063 NSG1A0A0A6YYJ2 146 aa19.2■□□□□ 0.66
CLK3-225ENST00000569063 SGK494L7N484 410 aa19.2■□□□□ 0.66
CLK3-225ENST00000569063 FAM155BO75949 473 aa19.2■□□□□ 0.66
CLK3-225ENST00000569063 TUBB4AP04350 444 aa19.2■□□□□ 0.66
CLK3-225ENST00000569063 CD1DP15813 335 aa19.2■□□□□ 0.66
CLK3-225ENST00000569063 GGT5P36269 586 aa19.2■□□□□ 0.66
CLK3-225ENST00000569063 EFNA3P52797 238 aa19.2■□□□□ 0.66
CLK3-225ENST00000569063 REEP5Q00765 189 aa19.2■□□□□ 0.66
CLK3-225ENST00000569063 HERC3Q15034 1050 aa19.2■□□□□ 0.66
CLK3-225ENST00000569063 ATCAYQ86WG3 371 aa19.2■□□□□ 0.66
CLK3-225ENST00000569063 MMGT1Q8N4V1 131 aa19.2■□□□□ 0.66
CLK3-225ENST00000569063 AIF1LQ9BQI0 150 aa19.2■□□□□ 0.66
CLK3-225ENST00000569063 UNKQ9C0B0 810 aaKnown RBP19.2■□□□□ 0.66
CLK3-225ENST00000569063 LUZP4Q9P127 313 aa19.2■□□□□ 0.66
CLK3-225ENST00000569063 NAALAD2Q9Y3Q0 740 aa19.2■□□□□ 0.66
CLK3-225ENST00000569063 KLHL18O94889 574 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 WDR47O94967 919 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 GNAZP19086 355 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 VARSP26640 1264 aaKnown RBP19.19■□□□□ 0.66
CLK3-225ENST00000569063 GDF5P43026 501 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 XCR1P46094 333 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 RGS1Q08116 209 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 OR4D1Q15615 310 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 INPP5JQ15735 1006 aaPredicted RBP19.19■□□□□ 0.66
CLK3-225ENST00000569063 C18orf21Q32NC0 220 aaPredicted RBP19.19■□□□□ 0.66
CLK3-225ENST00000569063 FAAH2Q6GMR7 532 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 Q6ZS92 163 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 TMPRSS11BQ86T26 416 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 GPSM1Q86YR5 675 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 KBTBD2Q8IY47 623 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 SHISA5Q8N114 240 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 TCAIMQ8N3R3 496 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 EFCAB3Q8N7B9 438 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 ANKRD53Q8N9V6 530 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 ZNF592Q92610 1267 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 VN1R1Q9GZP7 353 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 ZNF700Q9H0M5 742 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 HCN3Q9P1Z3 774 aa19.19■□□□□ 0.66
CLK3-225ENST00000569063 NCF1BA6NI72 391 aaPredicted RBP19.18■□□□□ 0.66
CLK3-225ENST00000569063 NCF1CA8MVU1 366 aaPredicted RBP19.18■□□□□ 0.66
CLK3-225ENST00000569063 GALR3O60755 368 aaPredicted RBP19.18■□□□□ 0.66
CLK3-225ENST00000569063 RDH16O75452 317 aa19.18■□□□□ 0.66
CLK3-225ENST00000569063 JRKO75564 520 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms