RNA–Protein interactions for RNA: ENST00000564578.5

KARS-204, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 5

Gene KARS, Length 1,942 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-204ENST00000564578 TCTE1Q5JU00 501 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 TMEM164Q5U3C3 297 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 MILR1Q7Z6M3 343 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 NUDCD3Q8IVD9 361 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.9□□□□□ -0.51
KARS-204ENST00000564578 LAS2Q8IYD9 372 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 DTWD1Q8N5C7 304 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 ZNF655Q8N720 491 aaPredicted RBP11.9□□□□□ -0.51
KARS-204ENST00000564578 CSNK1A1LQ8N752 337 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 SLC13A3Q8WWT9 602 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 ATP6V1E2Q96A05 226 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 NXPE2Q96DL1 559 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 TEFMQ96QE5 360 aaKnown RBP11.9□□□□□ -0.51
KARS-204ENST00000564578 ZNF382Q96SR6 550 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 ZPBPQ9BS86 351 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 AICDAQ9GZX7 198 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 ACBD3Q9H3P7 528 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 RUVBL1Q9Y265 456 aaKnown RBP11.9□□□□□ -0.51
KARS-204ENST00000564578 PCDHB3Q9Y5E6 796 aa11.9□□□□□ -0.51
KARS-204ENST00000564578 ZZEF1O43149 2961 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 H0YIV9 168 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 SCRG1O75711 98 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 OR4F21O95013 312 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 NTRK1P04629 796 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 CHRNGP07510 517 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 RBMS1P29558 406 aaKnown RBP11.89□□□□□ -0.51
KARS-204ENST00000564578 CYP4F2P78329 520 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 RBBP7Q16576 425 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 GGTA1PQ4G0N0 100 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 PAGE2BQ5JRK9 111 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 CFAP157Q5JU67 520 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 MED27Q6P2C8 311 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 CYB5D1Q6P9G0 228 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 MYLK4Q86YV6 388 aaPredicted RBP11.89□□□□□ -0.51
KARS-204ENST00000564578 GPR135Q8IZ08 494 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 KRT78Q8N1N4 520 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 KCT2Q8NC54 265 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 WDR20Q8TBZ3 569 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 MGARPQ8TDB4 240 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 AGAP11Q8TF27 550 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 RERGQ96A58 199 aaPredicted RBP11.89□□□□□ -0.51
KARS-204ENST00000564578 ULBP3Q9BZM4 244 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 RHBGQ9H310 441 aa11.89□□□□□ -0.51
KARS-204ENST00000564578 AKIRIN1Q9H9L7 192 aaPredicted RBP11.89□□□□□ -0.51
KARS-204ENST00000564578 TEX51A0A1B0GUA7 166 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 H3BQF6 201 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 STK17BO94768 372 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 KIAA0754O94854 1291 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 ESRRBO95718 433 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 FOXA1P55317 472 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 LAPTM5Q13571 262 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 ZRSR2Q15696 482 aaKnown RBP11.88□□□□□ -0.51
KARS-204ENST00000564578 ARL13AQ5H913 290 aaPredicted RBP11.88□□□□□ -0.51
KARS-204ENST00000564578 TLDC1Q6P9B6 456 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 GPRIN3Q6ZVF9 776 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 TIPARPQ7Z3E1 657 aaKnown RBP11.88□□□□□ -0.51
KARS-204ENST00000564578 ASPGQ86U10 573 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 TMEM126BQ8IUX1 230 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 RNF175Q8N4F7 328 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 CNDP1Q96KN2 507 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 C10orf90Q96M02 699 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 PAIP2Q9BPZ3 127 aaKnown RBP11.88□□□□□ -0.51
KARS-204ENST00000564578 SHCBP1LQ9BZQ2 653 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 C20orf27Q9GZN8 174 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 ZNF395Q9H8N7 513 aaPredicted RBP11.88□□□□□ -0.51
KARS-204ENST00000564578 DHCR7Q9UBM7 475 aaKnown RBP11.88□□□□□ -0.51
KARS-204ENST00000564578 ACSL6Q9UKU0 697 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 MRPS2Q9Y399 296 aaKnown RBP11.88□□□□□ -0.51
KARS-204ENST00000564578 TMEM184BQ9Y519 407 aaPredicted RBP11.88□□□□□ -0.51
KARS-204ENST00000564578 FER1L5A0AVI2 2057 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 ACACBO00763 2458 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 HYKKA2RU49 373 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.88□□□□□ -0.51
KARS-204ENST00000564578 FFAR3O14843 346 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 GPR42O15529 346 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 NDUFS4O43181 175 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 NPHS1O60500 1241 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 DLGAP3O95886 979 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 RORAP35398 523 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 ARL1P40616 181 aaPredicted RBP11.88□□□□□ -0.51
KARS-204ENST00000564578 NEK2P51955 445 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 PKNOX1P55347 436 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 NAA20P61599 178 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 PPP2R2AP63151 447 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 PWP1Q13610 501 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 GRM7Q14831 915 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 CHI3L2Q15782 390 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 TBC1D25Q3MII6 688 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 HHATQ5VTY9 493 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 RHBDD2Q6NTF9 364 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 TMEM214Q6NUQ4 689 aaKnown RBP11.88□□□□□ -0.51
KARS-204ENST00000564578 CDYL2Q8N8U2 506 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 TRPV3Q8NET8 790 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 HUS1BQ8NHY5 278 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 NT5CQ8TCD5 201 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 ZNF473Q8WTR7 871 aaKnown RBP11.88□□□□□ -0.51
KARS-204ENST00000564578 KCNA7Q96RP8 456 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 TRMOQ9BU70 441 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 SLC6A16Q9GZN6 736 aa11.88□□□□□ -0.51
KARS-204ENST00000564578 DRC3Q9H069 523 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms