RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 GDAP1Q8TB36 358 aa9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 ZFP3Q96NJ6 502 aa9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 GSDMAQ96QA5 445 aa9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 LPAR4Q99677 370 aa9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 TRAF4Q9BUZ4 470 aaPredicted RBP9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 CALHM2Q9HA72 323 aa9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 NLRC4Q9NPP4 1024 aa9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 KCMF1Q9P0J7 381 aa9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 STOX2Q9P2F5 926 aaPredicted RBP9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 HEATR1Q9H583 2144 aaKnown RBP9.74□□□□□ -0.85
HDGFL3-204ENST00000563790 A0A1W2PP18 115 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 PES1O00541 588 aaKnown RBP9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 MSTNO14793 375 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 UGT1A9O60656 530 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 CD8AP01732 235 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 PEBP1P30086 187 aaKnown RBP9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 RPL26P61254 145 aaKnown RBP9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 IL13RA1P78552 427 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 PRKG2Q13237 762 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 GGTLC2Q14390 218 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 KIR2DS3Q14952 304 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 FAM189A2Q15884 450 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 C15orf59Q2T9L4 293 aaPredicted RBP9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 PGGHGQ32M88 737 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 ATP13A5Q4VNC0 1218 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 SFT2D3Q587I9 215 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 ADGRD1Q6QNK2 874 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 RINLQ6ZS11 566 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 ZDHHC22Q8N966 263 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 NEIL3Q8TAT5 605 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 PLPPR2Q96GM1 343 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 CEP63Q96MT8 703 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 SPATA13Q96N96 652 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 FAM173AQ9BQD7 235 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 HGH1Q9BTY7 390 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 XPO4Q9C0E2 1151 aaKnown RBP9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 ESM1Q9NQ30 184 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 OR6C2Q9NZP2 312 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 ZC3H7BQ9UGR2 993 aaKnown RBP9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 PACSIN3Q9UKS6 424 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 RPL26L1Q9UNX3 145 aaKnown RBP9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 CHKBQ9Y259 395 aa9.73□□□□□ -0.85
HDGFL3-204ENST00000563790 HERC1Q15751 4861 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 SOWAHDA6NJG2 315 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 VWC2LB2RUY7 222 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 G3V4G9 280 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 DFFAO00273 331 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 POLBP06746 335 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 THBDP07204 575 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 CSF3P09919 207 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 HTR7P34969 479 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 UBA52P62987 128 aaKnown RBP9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 KRT85P78386 507 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 BOP1Q14137 746 aaKnown RBP9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 SYT16Q17RD7 645 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 KCTD11Q693B1 232 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 DPY19L2P1Q6NXN4 242 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 GJB7Q6PEY0 223 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 PM20D2Q8IYS1 436 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 LILRA3Q8N6C8 439 aaPredicted RBP9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 PHC3Q8NDX5 983 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 ADAD1Q96M93 576 aaKnown RBP9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 SOX7Q9BT81 388 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 TDRD1Q9BXT4 1180 aaKnown RBP9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 GTPBP4Q9BZE4 634 aaKnown RBP9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 PRDM14Q9GZV8 571 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 FAM8A1Q9UBU6 413 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 B3GALT5Q9Y2C3 310 aa9.72□□□□□ -0.85
HDGFL3-204ENST00000563790 CCT8L1PA6NM43 557 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 ISM1B1AKI9 464 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 C16orf97H3BN30 126 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 PPP1R3DO95685 299 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 FTCDO95954 541 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 CD86P42081 329 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 CRYZQ08257 329 aaKnown RBP9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 KIF5AQ12840 1032 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 DPYSQ14117 519 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 RHOUQ7L0Q8 258 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 SLFN11Q7Z7L1 901 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 DTX2Q86UW9 622 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 GALNT12Q8IXK2 581 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 BBS5Q8N3I7 341 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 FAM71BQ8TC56 605 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 MMABQ96EY8 250 aaPredicted RBP9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 FAM111AQ96PZ2 611 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 TSG101Q99816 390 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 SCAND2PQ9GZW5 306 aaPredicted RBP9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 CLSTN2Q9H4D0 955 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 ALG2Q9H553 416 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 UGT1A7Q9HAW7 530 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 ACKR4Q9NPB9 350 aa9.71□□□□□ -0.86
HDGFL3-204ENST00000563790 PABPN1LA6NDY0 278 aaKnown RBP9.7□□□□□ -0.86
HDGFL3-204ENST00000563790 CTSVO60911 334 aa9.7□□□□□ -0.86
HDGFL3-204ENST00000563790 ANXA5P08758 320 aa9.7□□□□□ -0.86
HDGFL3-204ENST00000563790 ACTN3Q08043 901 aaPredicted RBP9.7□□□□□ -0.86
HDGFL3-204ENST00000563790 QPCTQ16769 361 aa9.7□□□□□ -0.86
HDGFL3-204ENST00000563790 PRTGQ2VWP7 1150 aa9.7□□□□□ -0.86
HDGFL3-204ENST00000563790 MINDY4Q4G0A6 757 aa9.7□□□□□ -0.86
HDGFL3-204ENST00000563790 FRMPD2BQ6IN97 320 aa9.7□□□□□ -0.86
HDGFL3-204ENST00000563790 TRIM65Q6PJ69 517 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms