RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 SPATA13Q96N96 652 aa7.21□□□□□ -1.26
HERPUD1-206ENST00000563343 LPAR4Q99677 370 aa7.21□□□□□ -1.26
HERPUD1-206ENST00000563343 MAK16Q9BXY0 300 aaKnown RBP7.21□□□□□ -1.26
HERPUD1-206ENST00000563343 C10orf88Q9H8K7 445 aa7.21□□□□□ -1.26
HERPUD1-206ENST00000563343 LANCL2Q9NS86 450 aa7.21□□□□□ -1.26
HERPUD1-206ENST00000563343 UVRAGQ9P2Y5 699 aa7.21□□□□□ -1.26
HERPUD1-206ENST00000563343 TRHDEQ9UKU6 1024 aa7.21□□□□□ -1.26
HERPUD1-206ENST00000563343 OR14I1A6ND48 311 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 FIGNL2A6NMB9 653 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 CLCA1A8K7I4 914 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 IQCF5A8MTL0 148 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 BCKDKO14874 412 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 ARHGEF9O43307 516 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 CST8O60676 142 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 VPS26AO75436 327 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 GOSR1O95249 250 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 NSA2O95478 260 aaKnown RBP7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 KRT1P04264 644 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 PSMB4P28070 264 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 CMPK1P30085 196 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 XCR1P46094 333 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 ASCL1P50553 236 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 MYL5Q02045 173 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 RELAQ04206 551 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 NAA25Q14CX7 972 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 C1orf185Q5T7R7 199 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 MFSD4BQ5TF39 518 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 TRILQ7L0X0 811 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 BZW1Q7L1Q6 419 aaKnown RBP7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 NAXEQ8NCW5 288 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 NFAM1Q8NET5 270 aaPredicted RBP7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 CREB3L4Q8TEY5 395 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 STYXQ8WUJ0 223 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 ASZ1Q8WWH4 475 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 ZNF592Q92610 1267 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 TSLPQ969D9 159 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 RAD51AP1Q96B01 352 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 SMC6Q96SB8 1091 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 PIP5K1AQ99755 562 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 BDH2Q9BUT1 245 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 ACAT2Q9BWD1 397 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 CARD6Q9BX69 1037 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 PACSIN1Q9BY11 444 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 NUP62CLQ9H1M0 184 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 HCN3Q9P1Z3 774 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 CTTNBP2NLQ9P2B4 639 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 B4GALT7Q9UBV7 327 aa7.2□□□□□ -1.26
HERPUD1-206ENST00000563343 A0A0G2JMM0 328 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 A0A1W2PPB8 328 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 A0A1W2PRS3 328 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 KIR3DP1A8MWS1 328 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 MAGEB17A8MXT2 336 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 HACD1B0YJ81 288 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 HAT1O14929 419 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 WDR1O75083 606 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 GLSO94925 669 aaPredicted RBP7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 IL1RNP18510 177 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 ENDOUP21128 410 aaKnown RBP7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 MSNP26038 577 aaKnown RBP7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 AOAHP28039 575 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 RBL1P28749 1068 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 BCL6P41182 706 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 AVPR1BP47901 424 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 MPP1Q00013 466 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 CBLBQ13191 982 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 SPARCL1Q14515 664 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 SEMA3AQ14563 771 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 ABRAXAS2Q15018 415 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 NSDHLQ15738 373 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 LRRC38Q5VT99 294 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 KCTD11Q693B1 232 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 HMBOX1Q6NT76 420 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 PAOXQ6QHF9 649 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 RBM43Q6ZSC3 357 aaKnown RBP7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 KIAA0408Q6ZU52 694 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 VN1R4Q7Z5H5 301 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 PDSS2Q86YH6 399 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 SLC13A5Q86YT5 568 aaPredicted RBP7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 P3H2Q8IVL5 708 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 CYP4Z2PQ8N1L4 340 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 CCDC138Q96M89 665 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 TBL1YQ9BQ87 522 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 CNPPD1Q9BV87 410 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 ATG10Q9H0Y0 220 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 MRPS30Q9NP92 439 aaKnown RBP7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 SPATA7Q9P0W8 599 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 PCYOX1Q9UHG3 505 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 FEZ2Q9UHY8 353 aaPredicted RBP7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 LCMT1Q9UIC8 334 aa7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 RUVBL2Q9Y230 463 aaKnown RBP7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 R3HDM2Q9Y2K5 976 aaKnown RBP7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 YLPM1P49750 1951 aaKnown RBP7.19□□□□□ -1.26
HERPUD1-206ENST00000563343 MEGF8Q7Z7M0 2845 aa7.18□□□□□ -1.26
HERPUD1-206ENST00000563343 CCDC162PA2VCL2 907 aa7.18□□□□□ -1.26
HERPUD1-206ENST00000563343 MROH6A6NGR9 719 aa7.18□□□□□ -1.26
HERPUD1-206ENST00000563343 TUBAL3A6NHL2 446 aa7.18□□□□□ -1.26
HERPUD1-206ENST00000563343 FAM166BA8MTA8 275 aa7.18□□□□□ -1.26
HERPUD1-206ENST00000563343 KDM4EB2RXH2 506 aaPredicted RBP7.18□□□□□ -1.26
HERPUD1-206ENST00000563343 SGK494L7N484 410 aa7.18□□□□□ -1.26
HERPUD1-206ENST00000563343 AQP7O14520 342 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms