RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 C10orf53Q8N6V4 93 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 PYDC1Q8WXC3 89 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 CLIP3Q96DZ5 547 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 SLC35C2Q9NQQ7 365 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 SMOXQ9NWM0 555 aa7.31□□□□□ -1.24
TCF4-216ENST00000562680 RPS17P08708 135 aaKnown RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 MYOGP15173 224 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 GTF2E2P29084 291 aaKnown RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 CTHP32929 405 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 SLC6A11P48066 632 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 PTDSS1P48651 473 aaKnown RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 PSMD4P55036 377 aaKnown RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 RPL6Q02878 288 aaKnown RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 ZNF763Q0D2J5 394 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 LARS2Q15031 903 aaKnown RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 ANGPT1Q15389 498 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 EGFLAMQ63HQ2 1017 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 PIANPQ8IYJ0 282 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 TMEM145Q8NBT3 493 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 PIK3C3Q8NEB9 887 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 EXOSC8Q96B26 276 aaKnown RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 MCMBPQ9BTE3 642 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 OSBPL11Q9BXB4 747 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 KCNH6Q9H252 994 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 S100A14Q9HCY8 104 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 PCTPQ9UKL6 214 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 CFL2Q9Y281 166 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 A0A1W2PRB8 838 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 YKT6O15498 198 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 CHRNB1P11230 501 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 PHC1P78364 1004 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 HMGCS1Q01581 520 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 CYP4F3Q08477 520 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 CTC1Q2NKJ3 1217 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 TNFAIP8L3Q5GJ75 292 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 C6orf136Q5SQH8 315 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 C9orf50Q5SZB4 431 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 PDZD3Q86UT5 571 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 PDPRQ8NCN5 879 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 ADAMTS18Q8TE60 1221 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 RIT1Q92963 219 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 MOAP1Q96BY2 351 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 RBM18Q96H35 190 aaKnown RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 SLC35G5Q96KT7 338 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 TMEM79Q9BSE2 394 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 APOOQ9BUR5 198 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 IFT80Q9P2H3 777 aaPredicted RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 PPM1HQ9ULR3 514 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 AK5Q9Y6K8 562 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 OTOFQ9HC10 1997 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 CAPN5O15484 640 aaPredicted RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 AP1G1O43747 822 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 TNFRSF21O75509 655 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 CFIP05156 583 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 FAM214AQ32MH5 1076 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 C6orf89Q6UWU4 347 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 ADAMTSL4Q6UY14 1074 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 NAPRTQ6XQN6 538 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 LMX1AQ8TE12 382 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 PHF10Q8WUB8 498 aaKnown RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 STON2Q8WXE9 905 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 ZDHHC12Q96GR4 267 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 CADM1Q9BY67 442 aaKnown RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 PRSS16Q9NQE7 514 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 SPATA6Q9NWH7 488 aaPredicted RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 ACTL7AQ9Y615 435 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 KIR2DS5A0A0G2JLQ3 304 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 A0A0G2JNG1 304 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 GRXCR2A6NFK2 248 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 G3V2L1 256 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 KIR2DS3K7RE56 304 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 ENTPD5O75356 428 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 KRT36O76013 467 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 SGSHP51688 502 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 ABHD18Q0P651 414 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 KIR2DS5Q14953 304 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 ZNF423Q2M1K9 1284 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 SNAP47Q5SQN1 464 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 OTUD3Q5T2D3 398 aaPredicted RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 FAM91A1Q658Y4 838 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 PNCKQ6P2M8 343 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 HACD2Q6Y1H2 254 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 SLC9A6Q92581 669 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 RMND5BQ96G75 393 aaPredicted RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 ART5Q96L15 291 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 CLK4Q9HAZ1 481 aaKnown RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 TMEM184CQ9NVA4 438 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 APOBEC3BQ9UH17 382 aaKnown RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 CA14Q9ULX7 337 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 RNF11Q9Y3C5 154 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 MAGED1Q9Y5V3 778 aaPredicted RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 A0A1B0GVG6 124 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 PRSS51A0A1B0GVH4 220 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 BOLA2-SMG1P6H3BVE0 249 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 ERI3O43414 337 aaKnown RBP7.3□□□□□ -1.24
TCF4-216ENST00000562680 C1SP09871 688 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 TTKP33981 857 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 PLA2G16P53816 162 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 CDK3Q00526 305 aa7.3□□□□□ -1.24
TCF4-216ENST00000562680 OR4D1Q15615 310 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms