RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 ZNF655Q8N720 491 aaPredicted RBP8.25□□□□□ -1.09
TRAF3-209ENST00000560463 ANKRD53Q8N9V6 530 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 FAM181AQ8N9Y4 354 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 MFSD9Q8NBP5 474 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 SRFBP1Q8NEF9 429 aaKnown RBP8.25□□□□□ -1.09
TRAF3-209ENST00000560463 OR4C6Q8NH72 309 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 OR10G6Q8NH81 332 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 PROKR1Q8TCW9 393 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 JPH3Q8WXH2 748 aaPredicted RBP8.25□□□□□ -1.09
TRAF3-209ENST00000560463 STARD8Q92502 1023 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 SLC7A6OSQ96CW6 309 aaPredicted RBP8.25□□□□□ -1.09
TRAF3-209ENST00000560463 MARK4Q96L34 752 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 ZBTB18Q99592 522 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 BTBD10Q9BSF8 475 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 C1orf50Q9BV19 199 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 TBC1D10AQ9BXI6 508 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 MS4A8Q9BY19 250 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 LRMDAQ9H2I8 198 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 GAREM1Q9H706 876 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 EFCAB1Q9HAE3 211 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 PRM3Q9NNZ6 103 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 SDAD1Q9NVU7 687 aaKnown RBP eCLIP8.25□□□□□ -1.09
TRAF3-209ENST00000560463 NDE1Q9NXR1 346 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 CCDC167Q9P0B6 97 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 LRIT1Q9P2V4 623 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 EPHA6Q9UF33 1036 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 POMT2Q9UKY4 750 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 PCDHGA4Q9Y5G9 962 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 FRYLO94915 3013 aa8.25□□□□□ -1.09
TRAF3-209ENST00000560463 PCNX2A6NKB5 2137 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 KIF26BQ2KJY2 2108 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 MYO15AQ9UKN7 3530 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 COL27A1Q8IZC6 1860 aaPredicted RBP8.24□□□□□ -1.09
TRAF3-209ENST00000560463 FAM234BA2RU67 622 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 CFAP73A6NFT4 308 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 URADA6NGE7 173 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 HAT1O14929 419 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 ANKRD28O15084 1053 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 GYG2O15488 501 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 LCMT2O60294 686 aaKnown RBP8.24□□□□□ -1.09
TRAF3-209ENST00000560463 PCDHGA12O60330 932 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 DNAJC8O75937 253 aaPredicted RBP8.24□□□□□ -1.09
TRAF3-209ENST00000560463 ETHE1O95571 254 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 TGFB1P01137 390 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 NPPAP01160 153 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 IL6P05231 212 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 KRT16P08779 473 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 G6PDP11413 515 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 BCKDHAP12694 445 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 MAGP20916 626 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 TIA1P31483 386 aaKnown RBP eCLIP8.24□□□□□ -1.09
TRAF3-209ENST00000560463 POLR2JP52435 117 aaKnown RBP8.24□□□□□ -1.09
TRAF3-209ENST00000560463 CLDN8P56748 225 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 KCNK10P57789 538 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 C21orf58P58505 322 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 ACTN3Q08043 901 aaPredicted RBP8.24□□□□□ -1.09
TRAF3-209ENST00000560463 PWP1Q13610 501 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 RCAN2Q14206 197 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 DPY19L1Q2PZI1 675 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 ADPRMQ3LIE5 342 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 MANEAQ5SRI9 462 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 KHDRBS2Q5VWX1 349 aaKnown RBP8.24□□□□□ -1.09
TRAF3-209ENST00000560463 FCRL6Q6DN72 434 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 LAIR1Q6GTX8 287 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 ASRGL1Q7L266 308 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 VN1R5Q7Z5H4 357 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 SNX32Q86XE0 403 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 FUNDC1Q8IVP5 155 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 SLC35F3Q8IY50 421 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 ARHGAP24Q8N264 748 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 RNF175Q8N4F7 328 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 C1orf52Q8N6N3 182 aaKnown RBP8.24□□□□□ -1.09
TRAF3-209ENST00000560463 KYQ8NBH2 561 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 PCYOX1LQ8NBM8 494 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 BAHD1Q8TBE0 780 aaPredicted RBP8.24□□□□□ -1.09
TRAF3-209ENST00000560463 CREB3L4Q8TEY5 395 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 RSC1A1Q92681 617 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 RGMAQ96B86 450 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 KLHL29Q96CT2 875 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 ZDHHC12Q96GR4 267 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 APIPQ96GX9 242 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 QRFPRQ96P65 431 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 CD180Q99467 661 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 PRRX2Q99811 253 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 MRPL1Q9BYD6 325 aaKnown RBP8.24□□□□□ -1.09
TRAF3-209ENST00000560463 DPY30Q9C005 99 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 CHRNA10Q9GZZ6 450 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 ABCG4Q9H172 646 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 MMADHCQ9H3L0 296 aaPredicted RBP8.24□□□□□ -1.09
TRAF3-209ENST00000560463 SEMA6CQ9H3T2 930 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 C1GALT1Q9NS00 363 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 MCM8Q9UJA3 840 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 ADAM29Q9UKF5 820 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 PADI4Q9UM07 663 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 WBP11Q9Y2W2 641 aaKnown RBP8.24□□□□□ -1.09
TRAF3-209ENST00000560463 NDUFAF1Q9Y375 327 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 RNF215Q9Y6U7 377 aa8.24□□□□□ -1.09
TRAF3-209ENST00000560463 LOC100653049A0A140TA62 436 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 A0A1W2PP18 115 aa8.23□□□□□ -1.09
TRAF3-209ENST00000560463 LRIT2A6NDA9 550 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms