RNA–Protein interactions for RNA: ENST00000560051.1

HMGB3P26-201, Transcript of high mobility group box 3 pseudogene 26, humanhuman

BASIC

Gene HMGB3P26, Length 582 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P26-201ENST00000560051 CD27P26842 260 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 CRABP1P29762 137 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 BDKRB2P30411 391 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 HOXC9P31274 260 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 CHI3L1P36222 383 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 HSPA9P38646 679 aaKnown RBP4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 GSSP48637 474 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 PGDP52209 483 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 PNLIPRP2P54317 469 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 RAD23BP54727 409 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 SLURP1P55000 103 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 PKNOX1P55347 436 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 WNT3P56703 355 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 NUP107P57740 925 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 TAS2R60P59551 318 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 FLI1Q01543 452 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 NPTX1Q15818 432 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 EZH2Q15910 746 aaKnown RBP4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 GUK1Q16774 197 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 AMZ1Q400G9 498 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 GPR107Q5VW38 600 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 SEL1L3Q68CR1 1132 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 SLC9A4Q6AI14 798 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 DOK6Q6PKX4 331 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 FIGLAQ6QHK4 219 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 WDR88Q6ZMY6 472 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 SSX9Q7RTT3 188 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 PID1Q7Z2X4 250 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 PRSS42Q7Z5A4 293 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 CENPVQ7Z7K6 275 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 SLC26A11Q86WA9 606 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 C1orf210Q8IVY1 113 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 IFT20Q8IY31 132 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 LRRC75A-AS1Q8N1F1 130 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 CLEC18CQ8NCF0 446 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 CATSPER1Q8NEC5 780 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 DNAAF1Q8NEP3 725 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 DBF4BQ8NFT6 615 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 SH3RF2Q8TEC5 729 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 FAM172AQ8WUF8 416 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 S100PBPQ96BU1 408 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 ULK4Q96C45 1275 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 THOC3Q96J01 351 aaKnown RBP4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 DNAJC1Q96KC8 554 aaKnown RBP4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 LMLNQ96KR4 655 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 C5orf34Q96MH7 638 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 TRIB1Q96RU8 372 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 CD180Q99467 661 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 SEPT5Q99719 369 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 PRRT1Q99946 306 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 FAM110AQ9BQ89 295 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 C17orf80Q9BSJ5 609 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 MED10Q9BTT4 135 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 ALG12Q9BV10 488 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 JAM3Q9BX67 310 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 GSDMCQ9BYG8 508 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 ANKRD60Q9BZ19 345 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 GLIS2Q9BZE0 524 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 TM6SF2Q9BZW4 377 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 OPN3Q9H1Y3 402 aaPredicted RBP4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 WDCPQ9H6R7 721 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 GEMIN7Q9H840 131 aaKnown RBP4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 C10orf88Q9H8K7 445 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 AGO3Q9H9G7 860 aaKnown RBP4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 VAT1LQ9HCJ6 419 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 PDGFCQ9NRA1 345 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 ACSL6Q9UKU0 697 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 PLA2G4CQ9UP65 541 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 GRIP1Q9Y3R0 1128 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 SLCO1B1Q9Y6L6 691 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 USH1CQ9Y6N9 552 aa4.34□□□□□ -1.71
HMGB3P26-201ENST00000560051 ZNF518AQ6AHZ1 1483 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 EIF3AQ14152 1382 aaKnown RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ZNF541Q9H0D2 1346 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 SALL1Q9NSC2 1324 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 A0A0J9YVX5 310 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 TEX13CA0A0J9YWL9 993 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 EDDM13A0A1B0GTR0 161 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 A0A1W2PPQ1 181 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 MBD3L4A6NDZ8 208 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 FAM90A18PA6NE21 464 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 MBD3L3A6NE82 208 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 FAM90A16PA6NEW6 464 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ASB14A6NK59 587 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 FAM90A9PA6NNJ1 464 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ERI2A8K979 691 aaKnown RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 FAM90A5PA8MXJ8 464 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 C9JVG2 144 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 PEX12O00623 359 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 CES2O00748 559 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 TOR1AO14656 332 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 ADAMDEC1O15204 470 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 PFDN6O15212 129 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 RNF13O43567 381 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 KDELR3O43731 214 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 LCMT2O60294 686 aaKnown RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 BCAS1O75363 584 aaPredicted RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 RSL1D1O76021 490 aaKnown RBP4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 EFEMP2O95967 443 aa4.33□□□□□ -1.72
HMGB3P26-201ENST00000560051 SERPIND1P05546 499 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms