RNA–Protein interactions for RNA: ENST00000559937.1

SMAD3-212, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 579 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-212ENST00000559937 ANKRD46Q86W74 232 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 DCP2Q8IU60 420 aaKnown RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 CLVS1Q8IUQ0 354 aaPredicted RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 TRAPPC5Q8IUR0 188 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 DCUN1D3Q8IWE4 304 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 SLC30A8Q8IWU4 369 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 SYTL1Q8IYJ3 562 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 C10orf111Q8N326 155 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 METTL4Q8N3J2 472 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 OXR1Q8N573 874 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 LILRA3Q8N6C8 439 aaPredicted RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 NATD1Q8N6N6 113 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 CHDHQ8NE62 594 aaPredicted RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 OR13F1Q8NGS4 319 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 HUS1BQ8NHY5 278 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 CXorf40AQ8TE69 158 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 ZFP90Q8TF47 636 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 SMARCD2Q92925 531 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 NEIL2Q969S2 332 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 NXPE3Q969Y0 559 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 RAD51AP1Q96B01 352 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 RSPRY1Q96DX4 576 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 COX14Q96I36 57 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 ASB16Q96NS5 453 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 FAM129BQ96TA1 746 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 AMBRA1Q9C0C7 1298 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 PITHD1Q9GZP4 211 aaPredicted RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 OR2AG1Q9H205 316 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 TMEM245Q9H330 911 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 TRIT1Q9H3H1 467 aaKnown RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 REEP4Q9H6H4 257 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 SFXN1Q9H9B4 322 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 POLR1BQ9H9Y6 1135 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 CXorf21Q9HAI6 301 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 PELI2Q9HAT8 420 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 SMURF2Q9HAU4 748 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 TPT1P8Q9HAU6 139 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 DMRT3Q9NQL9 472 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 CCDC177Q9NQR7 707 aaPredicted RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 ADPRHL2Q9NX46 363 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 SPATA7Q9P0W8 599 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 GULP1Q9UBP9 304 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 TMEFF2Q9UIK5 374 aaPredicted RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 BAG5Q9UL15 447 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 ITM2BQ9Y287 266 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 NAALAD2Q9Y3Q0 740 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 PRRC2BQ5JSZ5 2229 aaKnown RBP7.79□□□□□ -1.16
SMAD3-212ENST00000559937 DOCK8Q8NF50 2099 aa7.79□□□□□ -1.16
SMAD3-212ENST00000559937 TRPM6Q9BX84 2022 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 NUMA1Q14980 2115 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 LOC100130705A0A1B0GUX0 176 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 PIPSLA2A3N6 862 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 KRT87PA6NCN2 255 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 GPR89AB7ZAQ6 455 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 M0QX08 132 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 HS6ST1O60243 411 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 NOBOXO60393 691 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 GPR37L1O60883 481 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 POP7O75817 140 aaKnown RBP7.78□□□□□ -1.16
SMAD3-212ENST00000559937 SEC14L2O76054 403 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 SEMA3DO95025 777 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 ETHE1O95571 254 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 CPSF4O95639 269 aaKnown RBP7.78□□□□□ -1.16
SMAD3-212ENST00000559937 ZNF682O95780 498 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 CLIC3O95833 236 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 GPR89BP0CG08 455 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 LAMP1P11279 417 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 ZNF8P17098 575 aaPredicted RBP7.78□□□□□ -1.16
SMAD3-212ENST00000559937 PCSK6P29122 969 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 PBLDP30039 288 aaPredicted RBP7.78□□□□□ -1.16
SMAD3-212ENST00000559937 MAGEA10P43363 369 aaPredicted RBP7.78□□□□□ -1.16
SMAD3-212ENST00000559937 TMBIM6P55061 237 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 CXCR4P61073 352 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 TAP2Q03519 686 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 CD47Q08722 323 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 FADDQ13158 208 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 PMS2P3Q13401 168 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 SPIDRQ14159 915 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 RGNQ15493 299 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 LRRC23Q53EV4 343 aaPredicted RBP7.78□□□□□ -1.16
SMAD3-212ENST00000559937 ZNF697Q5TEC3 545 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 FAM46CQ5VWP2 391 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 AP1ARQ63HQ0 302 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 KDM4DQ6B0I6 523 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 FAM71E1Q6IPT2 247 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 KCTD8Q6ZWB6 473 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 CCDC80Q76M96 950 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 COMMD6Q7Z4G1 85 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 C11orf96Q7Z7L8 435 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 TMEM179BQ7Z7N9 219 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 HORMAD1Q86X24 394 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 ZC3H7AQ8IWR0 971 aaKnown RBP7.78□□□□□ -1.16
SMAD3-212ENST00000559937 CFAP206Q8IYR0 622 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 CLECL1Q8IZS7 167 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 KRT78Q8N1N4 520 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 RNF175Q8N4F7 328 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 ZNF366Q8N895 744 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 C11orf65Q8NCR3 313 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 PIK3C3Q8NEB9 887 aa7.78□□□□□ -1.16
SMAD3-212ENST00000559937 OR52N2Q8NGI0 321 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms