RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 SNIP1Q8TAD8 396 aaKnown RBP10.38□□□□□ -0.75
TPM1-217ENST00000559108 ZCCHC10Q8TBK6 192 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 RDH11Q8TC12 318 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 NKD1Q969G9 470 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 PTCD3Q96EY7 689 aaKnown RBP10.38□□□□□ -0.75
TPM1-217ENST00000559108 NAF1Q96HR8 494 aaKnown RBP10.38□□□□□ -0.75
TPM1-217ENST00000559108 ZNF578Q96N58 590 aaPredicted RBP10.38□□□□□ -0.75
TPM1-217ENST00000559108 GBP5Q96PP8 586 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 B3GNT4Q9C0J1 378 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 EHD1Q9H4M9 534 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 CCDC86Q9H6F5 360 aaKnown RBP10.38□□□□□ -0.75
TPM1-217ENST00000559108 ACTR5Q9H9F9 607 aaPredicted RBP10.38□□□□□ -0.75
TPM1-217ENST00000559108 FARSBQ9NSD9 589 aaKnown RBP10.38□□□□□ -0.75
TPM1-217ENST00000559108 SENP1Q9P0U3 644 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 TMCO1Q9UM00 188 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 PCDHB3Q9Y5E6 796 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 ACTL7BQ9Y614 415 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 AP1M2Q9Y6Q5 423 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 USP24Q9UPU5 2620 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 DMXL2Q8TDJ6 3036 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 ACACAQ13085 2346 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 ACACBO00763 2458 aa10.38□□□□□ -0.75
TPM1-217ENST00000559108 LOC101059948A0A1B0GTJ6 334 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 HYKKA2RU49 373 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 WDR91A4D1P6 747 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 TMEM233B4DJY2 109 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 CLGNO14967 610 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 NDUFS4O43181 175 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 RAD1O60671 282 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 SRPX2O60687 465 aaPredicted RBP10.37□□□□□ -0.75
TPM1-217ENST00000559108 SH3BGRLO75368 114 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 SUPT7LO94864 414 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 CHRNGP07510 517 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 TAC1P20366 129 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 HRH2P25021 359 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 NEK2P51955 445 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 DNAJB13P59910 316 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 RBBP5Q15291 538 aaKnown RBP10.37□□□□□ -0.75
TPM1-217ENST00000559108 SYT16Q17RD7 645 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 RHBDD2Q6NTF9 364 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 TMEM214Q6NUQ4 689 aaKnown RBP10.37□□□□□ -0.75
TPM1-217ENST00000559108 TMIGD1Q6UXZ0 262 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 FRMD7Q6ZUT3 714 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 UBE3DQ7Z6J8 389 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 PROSER1Q86XN7 944 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 DSELQ8IZU8 1212 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 AMER2Q8N7J2 671 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 CCNYL1Q8N7R7 359 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 AMER3Q8N944 861 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 ANKRD42Q8N9B4 389 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 CCDC63Q8NA47 563 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 OR7G3Q8NG95 312 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 OR8K5Q8NH50 307 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 WDR20Q8TBZ3 569 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 NT5CQ8TCD5 201 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 AGAP11Q8TF27 550 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 ZNF473Q8WTR7 871 aaKnown RBP10.37□□□□□ -0.75
TPM1-217ENST00000559108 CT55Q8WUE5 264 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 ZCCHC14Q8WYQ9 949 aaKnown RBP10.37□□□□□ -0.75
TPM1-217ENST00000559108 ATP6V1G3Q96LB4 118 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 CNTNAP3BQ96NU0 1288 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 TEFMQ96QE5 360 aaKnown RBP10.37□□□□□ -0.75
TPM1-217ENST00000559108 HBEGFQ99075 208 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 AIF1LQ9BQI0 150 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 MESP1Q9BRJ9 268 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 NTMT1Q9BV86 223 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 CNTNAP3Q9BZ76 1288 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 ASPSCR1Q9BZE9 553 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 SHCBP1LQ9BZQ2 653 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 SLC6A16Q9GZN6 736 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 C20orf27Q9GZN8 174 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 RHBGQ9H310 441 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 NT5DC2Q9H857 520 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 ACTR8Q9H981 624 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 LHX9Q9NQ69 397 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 THSD1Q9NS62 852 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 CUTCQ9NTM9 273 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 ZFP69BQ9UJL9 534 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 SSUH2Q9Y2M2 353 aa10.37□□□□□ -0.75
TPM1-217ENST00000559108 TNPO3Q9Y5L0 923 aaKnown RBP10.37□□□□□ -0.75
TPM1-217ENST00000559108 A0A0G2JN53 185 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 ZNF860A6NHJ4 632 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 H3BQF6 201 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 MEN1O00255 615 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 ITM2AO43736 263 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 CPNE3O75131 537 aaKnown RBP10.36□□□□□ -0.75
TPM1-217ENST00000559108 LYPLA1O75608 230 aaPredicted RBP10.36□□□□□ -0.75
TPM1-217ENST00000559108 SMIM10L1P0DMW3 83 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 CHN1P15882 459 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 IL1RNP18510 177 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 ITPKBP27987 946 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 AHRP35869 848 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 EIF2S3P41091 472 aaKnown RBP10.36□□□□□ -0.75
TPM1-217ENST00000559108 HNF4AP41235 474 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 STAT5AP42229 794 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 OR1D4P47884 311 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 ATP1A2P50993 1020 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 RPS18P62269 152 aaKnown RBP10.36□□□□□ -0.75
TPM1-217ENST00000559108 OLR1P78380 273 aa10.36□□□□□ -0.75
TPM1-217ENST00000559108 MAT1AQ00266 395 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms