RNA–Protein interactions for RNA: ENST00000555543.1

VTI1B-205, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

TSL 2

Gene VTI1B, Length 718 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-205ENST00000555543 CLEC1AQ8NC01 280 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 FMO2Q99518 471 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 YIPF2Q9BWQ6 316 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 PELI2Q9HAT8 420 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 GPR83Q9NYM4 423 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 DYRK1BQ9Y463 629 aa19.45■□□□□ 0.7
VTI1B-205ENST00000555543 TAPBPO15533 448 aa19.44■□□□□ 0.7
VTI1B-205ENST00000555543 NDUFS4O43181 175 aa19.44■□□□□ 0.7
VTI1B-205ENST00000555543 WDR47O94967 919 aa19.44■□□□□ 0.7
VTI1B-205ENST00000555543 NSA2O95478 260 aaKnown RBP19.44■□□□□ 0.7
VTI1B-205ENST00000555543 IGHEP01854 428 aa19.44■□□□□ 0.7
VTI1B-205ENST00000555543 SLC35G6P0C7Q6 338 aa19.44■□□□□ 0.7
VTI1B-205ENST00000555543 KCNC1P48547 511 aa19.44■□□□□ 0.7
VTI1B-205ENST00000555543 NXPE4Q6UWF7 544 aa19.44■□□□□ 0.7
VTI1B-205ENST00000555543 TEX19Q8NA77 164 aa19.44■□□□□ 0.7
VTI1B-205ENST00000555543 OR11G2Q8NGC1 345 aa19.44■□□□□ 0.7
VTI1B-205ENST00000555543 KIAA1191Q96A73 305 aa19.44■□□□□ 0.7
VTI1B-205ENST00000555543 C8orf44Q96CB5 159 aa19.44■□□□□ 0.7
VTI1B-205ENST00000555543 CYTH2Q99418 400 aa19.44■□□□□ 0.7
VTI1B-205ENST00000555543 SMAD5Q99717 465 aaKnown RBP19.44■□□□□ 0.7
VTI1B-205ENST00000555543 TGIF2Q9GZN2 237 aa19.44■□□□□ 0.7
VTI1B-205ENST00000555543 ACSS3Q9H6R3 686 aa19.44■□□□□ 0.7
VTI1B-205ENST00000555543 MKKSQ9NPJ1 570 aaPredicted RBP19.44■□□□□ 0.7
VTI1B-205ENST00000555543 IGSF5Q9NSI5 407 aa19.44■□□□□ 0.7
VTI1B-205ENST00000555543 C14orf105Q9NVL8 296 aa19.44■□□□□ 0.7
VTI1B-205ENST00000555543 KCNE2Q9Y6J6 123 aa19.44■□□□□ 0.7
VTI1B-205ENST00000555543 MYO18BQ8IUG5 2567 aa19.43■□□□□ 0.7
VTI1B-205ENST00000555543 IDSB3KWA1 339 aa19.43■□□□□ 0.7
VTI1B-205ENST00000555543 SGK494L7N484 410 aa19.43■□□□□ 0.7
VTI1B-205ENST00000555543 JRKO75564 520 aa19.43■□□□□ 0.7
VTI1B-205ENST00000555543 ACSL3O95573 720 aa19.43■□□□□ 0.7
VTI1B-205ENST00000555543 VARSP26640 1264 aaKnown RBP19.43■□□□□ 0.7
VTI1B-205ENST00000555543 PHBP35232 272 aa19.43■□□□□ 0.7
VTI1B-205ENST00000555543 SCTRP47872 440 aa19.43■□□□□ 0.7
VTI1B-205ENST00000555543 AVPR1BP47901 424 aa19.43■□□□□ 0.7
VTI1B-205ENST00000555543 CSRP3P50461 194 aa19.43■□□□□ 0.7
VTI1B-205ENST00000555543 MROH9Q5TGP6 573 aa19.43■□□□□ 0.7
VTI1B-205ENST00000555543 RAPH1Q70E73 1250 aa19.43■□□□□ 0.7
VTI1B-205ENST00000555543 ANKRD53Q8N9V6 530 aa19.43■□□□□ 0.7
VTI1B-205ENST00000555543 EXT2Q93063 718 aa19.43■□□□□ 0.7
VTI1B-205ENST00000555543 ESAMQ96AP7 390 aa19.43■□□□□ 0.7
VTI1B-205ENST00000555543 FUT8Q9BYC5 575 aa19.43■□□□□ 0.7
VTI1B-205ENST00000555543 ALG9Q9H6U8 611 aa19.43■□□□□ 0.7
VTI1B-205ENST00000555543 WWOXQ9NZC7 414 aa19.43■□□□□ 0.7
VTI1B-205ENST00000555543 HCN3Q9P1Z3 774 aa19.43■□□□□ 0.7
VTI1B-205ENST00000555543 ZNF451Q9Y4E5 1061 aa19.43■□□□□ 0.7
VTI1B-205ENST00000555543 H0YIG0 161 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 RDH16O75452 317 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 TFEBP19484 476 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 CRABP2P29373 138 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 GGT5P36269 586 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 SOX8P57073 446 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 IRF9Q00978 393 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 MYBPC3Q14896 1274 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 UAP1Q16222 522 aaPredicted RBP19.42■□□□□ 0.7
VTI1B-205ENST00000555543 TUBB8Q3ZCM7 444 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 NADK2Q4G0N4 442 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 VWA5B1Q5TIE3 1220 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 ATG9BQ674R7 924 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 FAAH2Q6GMR7 532 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 SLCO4C1Q6ZQN7 724 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 CEP128Q6ZU80 1094 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 CENPLQ8N0S6 344 aaPredicted RBP19.42■□□□□ 0.7
VTI1B-205ENST00000555543 CEP112Q8N8E3 955 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 PDPRQ8NCN5 879 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 ZNF552Q9H707 407 aaPredicted RBP19.42■□□□□ 0.7
VTI1B-205ENST00000555543 ATP13A2Q9NQ11 1180 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 ZFP69BQ9UJL9 534 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 RNF112Q9ULX5 631 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 G3BP2Q9UN86 482 aaKnown RBP19.42■□□□□ 0.7
VTI1B-205ENST00000555543 NAALAD2Q9Y3Q0 740 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 ASB1Q9Y576 335 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 PCDHGB7Q9Y5F8 929 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 SLC22A7Q9Y694 548 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 SCN3AQ9NY46 2000 aa19.42■□□□□ 0.7
VTI1B-205ENST00000555543 PRRC2CQ9Y520 2896 aaKnown RBP19.42■□□□□ 0.7
VTI1B-205ENST00000555543 ZNF860A6NHJ4 632 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 KLHL18O94889 574 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 BMP10O95393 424 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 B3GALT4O96024 378 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 SERPIND1P05546 499 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 LTA4HP09960 611 aaKnown RBP19.41■□□□□ 0.7
VTI1B-205ENST00000555543 ACPPP15309 386 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 HSPA7P48741 367 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 EMP2P54851 167 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 Q0VFX4 171 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 CDC16Q13042 620 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 AIMP2Q13155 320 aaKnown RBP19.41■□□□□ 0.7
VTI1B-205ENST00000555543 PWP1Q13610 501 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 CDKL4Q5MAI5 379 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 TBC1D1Q86TI0 1168 aaPredicted RBP19.41■□□□□ 0.7
VTI1B-205ENST00000555543 ISCA2Q86U28 154 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 TCAIMQ8N3R3 496 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 AFAP1L2Q8N4X5 818 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 LRRN4CLQ8ND94 238 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 NT5CQ8TCD5 201 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 KCTD4Q8WVF5 259 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 NXNL1Q96CM4 212 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 ATOH8Q96SQ7 321 aa19.41■□□□□ 0.7
VTI1B-205ENST00000555543 AIF1LQ9BQI0 150 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms