RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 TIAF1O95411 115 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 TBX6O95947 436 aaPredicted RBP12.1□□□□□ -0.47
SYNE2-219ENST00000555323 SERPINE1P05121 402 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 SERPINA6P08185 405 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 RBMS1P29558 406 aaKnown RBP12.1□□□□□ -0.47
SYNE2-219ENST00000555323 SERPINB1P30740 379 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 PIK3CBP42338 1070 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 MAPK10P53779 464 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 ARSFP54793 590 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 VSX2P58304 361 aaPredicted RBP12.1□□□□□ -0.47
SYNE2-219ENST00000555323 ZNF33BQ06732 778 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 CYP4F3Q08477 520 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 FAM53BQ14153 422 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 RCN2Q14257 317 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 GRM7Q14831 915 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 ZRSR2Q15696 482 aaKnown RBP12.1□□□□□ -0.47
SYNE2-219ENST00000555323 CHI3L2Q15782 390 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 CPSF6Q16630 551 aaKnown RBP eCLIP12.1□□□□□ -0.47
SYNE2-219ENST00000555323 FAM214AQ32MH5 1076 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 ARL13AQ5H913 290 aaPredicted RBP12.1□□□□□ -0.47
SYNE2-219ENST00000555323 GARNL3Q5VVW2 1013 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 CES4AQ5XG92 561 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 RHBDD2Q6NTF9 364 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 ATG14Q6ZNE5 492 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 GPRIN3Q6ZVF9 776 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 VN1R5Q7Z5H4 357 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 ASPGQ86U10 573 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 CSNK1A1LQ8N752 337 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 ZNF473Q8WTR7 871 aaKnown RBP12.1□□□□□ -0.47
SYNE2-219ENST00000555323 PMEPA1Q969W9 287 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 REPS1Q96D71 796 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 LRFN5Q96NI6 719 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 CTRCQ99895 268 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 EML4Q9HC35 981 aaKnown RBP12.1□□□□□ -0.47
SYNE2-219ENST00000555323 MID1IP1Q9NPA3 183 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 DKK4Q9UBT3 224 aa12.1□□□□□ -0.47
SYNE2-219ENST00000555323 TMEM184BQ9Y519 407 aaPredicted RBP12.1□□□□□ -0.47
SYNE2-219ENST00000555323 SERTM1A2A2V5 107 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 ANKDD1BA6NHY2 528 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 TMEM114B3SHH9 223 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 FOXE1O00358 373 aaPredicted RBP12.09□□□□□ -0.47
SYNE2-219ENST00000555323 KLF11O14901 512 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 ZNF749O43361 778 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 ONECUT2O95948 504 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 ENO1P06733 434 aaKnown RBP12.09□□□□□ -0.47
SYNE2-219ENST00000555323 HBQ1P09105 142 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 SMIM10L1P0DMW3 83 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 CHN1P15882 459 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 NR1D1P20393 614 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 CD82P27701 267 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 ARRB2P32121 409 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 HYAL2Q12891 473 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 RBBP7Q16576 425 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 HKDC1Q2TB90 917 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 ADPRMQ3LIE5 342 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 FRG2Q64ET8 278 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 TMEM214Q6NUQ4 689 aaKnown RBP12.09□□□□□ -0.47
SYNE2-219ENST00000555323 FOXR1Q6PIV2 292 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 ZCCHC23Q6ZST2 131 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 TRIM42Q8IWZ5 723 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.09□□□□□ -0.47
SYNE2-219ENST00000555323 ZNF655Q8N720 491 aaPredicted RBP12.09□□□□□ -0.47
SYNE2-219ENST00000555323 HUS1BQ8NHY5 278 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 MGARPQ8TDB4 240 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 NXPE2Q96DL1 559 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 SMIM10Q96HG1 83 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 ZNF578Q96N58 590 aaPredicted RBP12.09□□□□□ -0.47
SYNE2-219ENST00000555323 FRG2BQ96QU4 278 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 PAIP2Q9BPZ3 127 aaKnown RBP12.09□□□□□ -0.47
SYNE2-219ENST00000555323 SLC29A3Q9BZD2 475 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 SLC6A16Q9GZN6 736 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 HAO1Q9UJM8 370 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 SRPK3Q9UPE1 567 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 RUVBL1Q9Y265 456 aaKnown RBP12.09□□□□□ -0.47
SYNE2-219ENST00000555323 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.09□□□□□ -0.47
SYNE2-219ENST00000555323 SLC22A7Q9Y694 548 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 ADAMTS20P59510 1910 aa12.09□□□□□ -0.47
SYNE2-219ENST00000555323 HYKKA2RU49 373 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 LRIT2A6NDA9 550 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 P2RX6O15547 441 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 ITM2AO43736 263 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 BRINP1O60477 761 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 SNNO75324 88 aaPredicted RBP12.08□□□□□ -0.48
SYNE2-219ENST00000555323 SCRG1O75711 98 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 DLGAP3O95886 979 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 EIF2S1P05198 315 aaKnown RBP12.08□□□□□ -0.48
SYNE2-219ENST00000555323 CAPN1P07384 714 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 CHRNGP07510 517 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 SLC35G6P0C7Q6 338 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 ZNF28P17035 718 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 BGNP21810 368 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 SLC5A2P31639 672 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 RORAP35398 523 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 CCR10P46092 362 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 ARFIP1P53367 373 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 ABCE1P61221 599 aaKnown RBP12.08□□□□□ -0.48
SYNE2-219ENST00000555323 RGS1Q08116 209 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 STX3Q13277 289 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 MAP7Q14244 749 aa12.08□□□□□ -0.48
SYNE2-219ENST00000555323 MUM1Q2TAK8 710 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms