RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 TMEM207Q6UWW9 146 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 GFRALQ6UXV0 394 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 CEP128Q6ZU80 1094 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 CCDC25Q86WR0 208 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 CNTN4Q8IWV2 1026 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 ZNF808Q8N4W9 903 aaPredicted RBP11.23□□□□□ -0.61
CKAP4-202ENST00000552828 SIRT6Q8N6T7 355 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 CSNK1A1LQ8N752 337 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 OR9A1PQ8NGU1 263 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 SMPDL3AQ92484 453 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 CCDC120Q96HB5 630 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 PHF12Q96QT6 1004 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 ACAT2Q9BWD1 397 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 FAM129AQ9BZQ8 928 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 MTRF1LQ9UGC7 380 aaKnown RBP11.23□□□□□ -0.61
CKAP4-202ENST00000552828 DMGDHQ9UI17 866 aaKnown RBP11.23□□□□□ -0.61
CKAP4-202ENST00000552828 COMMD10Q9Y6G5 202 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 ZGRF1Q86YA3 2104 aa11.23□□□□□ -0.61
CKAP4-202ENST00000552828 ARHGEF33A8MVX0 844 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 TXNDC9O14530 226 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 CTIFO43310 598 aaKnown RBP11.22□□□□□ -0.61
CKAP4-202ENST00000552828 PRAMEF2O60811 474 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 NIPSNAP2O75323 286 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 UNC5CO95185 931 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 RASAL1O95294 804 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 CELA2AP08217 269 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 GSTA2P09210 222 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 MYBL2P10244 700 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 ITGAMP11215 1152 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 EZRP15311 586 aaKnown RBP11.22□□□□□ -0.61
CKAP4-202ENST00000552828 HIVEP1P15822 2718 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 MAGEA4P43358 317 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 EFNA3P52797 238 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 EEF1A2Q05639 463 aaKnown RBP11.22□□□□□ -0.61
CKAP4-202ENST00000552828 MGAT5Q09328 741 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 FAM53BQ14153 422 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 HKDC1Q2TB90 917 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 RPTNQ6XPR3 784 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 BNC2Q6ZN30 1099 aaPredicted RBP11.22□□□□□ -0.61
CKAP4-202ENST00000552828 GALNT7Q86SF2 657 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 ZC3H7AQ8IWR0 971 aaKnown RBP11.22□□□□□ -0.61
CKAP4-202ENST00000552828 IFT81Q8WYA0 676 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 MMABQ96EY8 250 aaPredicted RBP11.22□□□□□ -0.61
CKAP4-202ENST00000552828 TUBB6Q9BUF5 446 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.22□□□□□ -0.61
CKAP4-202ENST00000552828 TSPYL1Q9H0U9 437 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 L2HGDHQ9H9P8 463 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 MRPS30Q9NP92 439 aaKnown RBP11.22□□□□□ -0.61
CKAP4-202ENST00000552828 CHST11Q9NPF2 352 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 ZDHHC18Q9NUE0 388 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 UTP6Q9NYH9 597 aaKnown RBP11.22□□□□□ -0.61
CKAP4-202ENST00000552828 MOCS1Q9NZB8 636 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 ZFATQ9P243 1243 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 SUCOQ9UBS9 1254 aaKnown RBP11.22□□□□□ -0.61
CKAP4-202ENST00000552828 SEC14L3Q9UDX4 400 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 PCDHGB6Q9Y5F9 930 aa11.22□□□□□ -0.61
CKAP4-202ENST00000552828 TRGV8A0A0C4DH27 118 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 OR5H15A6NDH6 313 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 CCL21O00585 134 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 FFAR3O14843 346 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 GPR42O15529 346 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 AHSGP02765 367 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 CYC1P08574 325 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 F7P08709 466 aaPredicted RBP11.21□□□□□ -0.61
CKAP4-202ENST00000552828 ANXA5P08758 320 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 HTR1EP28566 365 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 SSTR1P30872 391 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 RPA3P35244 121 aaPredicted RBP11.21□□□□□ -0.61
CKAP4-202ENST00000552828 ABATP80404 500 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 TTLL9Q3SXZ7 439 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 ABHD17BQ5VST6 288 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 ICE2Q659A1 982 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 H3F3CQ6NXT2 135 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 ZNF549Q6P9A3 640 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 SUSD1Q6UWL2 747 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 CAPN12Q6ZSI9 719 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 C3orf62Q6ZUJ4 267 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 CYS1Q717R9 158 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 MRGPRGQ86SM5 289 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 FBXO15Q8NCQ5 510 aaPredicted RBP11.21□□□□□ -0.61
CKAP4-202ENST00000552828 CDKL2Q92772 493 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 KCNJ9Q92806 393 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 FAM136AQ96C01 138 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 AARSD1Q9BTE6 412 aaKnown RBP11.21□□□□□ -0.61
CKAP4-202ENST00000552828 YIPF2Q9BWQ6 316 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 DRC3Q9H069 523 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 NSMCE4AQ9NXX6 385 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 STMN3Q9NZ72 180 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 KLHL42Q9P2K6 505 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 TEKT2Q9UIF3 430 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 MKL2Q9ULH7 1088 aa11.21□□□□□ -0.61
CKAP4-202ENST00000552828 SETD2Q9BYW2 2564 aaPredicted RBP11.2□□□□□ -0.62
CKAP4-202ENST00000552828 A0A0A6YYC8 382 aaPredicted RBP11.2□□□□□ -0.62
CKAP4-202ENST00000552828 ZNF839A8K0R7 811 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 E7ENX8 843 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 H0YIG0 161 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 I3L1I5 382 aaPredicted RBP11.2□□□□□ -0.62
CKAP4-202ENST00000552828 CCNDBP1O95273 360 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 F10P00742 488 aa11.2□□□□□ -0.62
CKAP4-202ENST00000552828 C8orf89P0DMQ9 161 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms