RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 HEPACAMQ14CZ8 416 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 EXOC3L2Q2M3D2 409 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 CLEC12AQ5QGZ9 265 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 C9orf64Q5T6V5 341 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 LRRC66Q68CR7 880 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 THOC6Q86W42 341 aaKnown RBP9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 MDGA1Q8NFP4 955 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 DBF4BQ8NFT6 615 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 TIFAQ96CG3 184 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 EGLN2Q96KS0 407 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 FRMD6Q96NE9 622 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 WRAP53Q9BUR4 548 aaKnown RBP9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 OR51E2Q9H255 320 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 GORASP2Q9H8Y8 452 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 CCDC177Q9NQR7 707 aaPredicted RBP9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 UCKL1Q9NWZ5 548 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 DUX4Q9UBX2 424 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 HSPB11Q9Y547 144 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 PCDHGB6Q9Y5F9 930 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 KNL1Q8NG31 2342 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 PRAMEF33A0A0G2JMD5 474 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 LOC285095A0A1B0GVY8 99 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 PRAMEF10O60809 474 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 BCHEP06276 602 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 KLK1P06870 262 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 ATXN1LP0C7T5 689 aaKnown RBP9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 PCSK2P16519 638 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 IDUAP35475 653 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 AP1S2P56377 157 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 PROX2Q3B8N5 592 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 ZNF697Q5TEC3 545 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 ZNF691Q5VV52 312 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 LIPKQ5VXJ0 399 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 FAM171BQ6P995 826 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 ALKAL1Q6UXT8 129 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 B3GNT8Q7Z7M8 397 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 SLC5A8Q8N695 610 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 KCNN1Q92952 543 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 MUL1Q969V5 352 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 FAIM2Q9BWQ8 316 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 HEBP1Q9NRV9 189 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 SARDHQ9UL12 918 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 ZNF232Q9UNY5 417 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 TRIP11Q15643 1979 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 EOMESO95936 686 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 FGBP02675 491 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 MAD2L1BPQ15013 274 aaPredicted RBP9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 PTPRRQ15256 657 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 ATP13A5Q4VNC0 1218 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 MPPE1Q53F39 396 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 RUNDC3AQ59EK9 446 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 SPRYD7Q5W111 196 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 RNF130Q86XS8 419 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 UFD1Q92890 307 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 APIPQ96GX9 242 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 PTPN18Q99952 460 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 MAPKAP1Q9BPZ7 522 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 DOHHQ9BU89 302 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 ABCB8Q9NUT2 735 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 ABCG2Q9UNQ0 655 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 CARD8Q9Y2G2 431 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 GON4LQ3T8J9 2241 aa9.89□□□□□ -0.83
SMARCC2-209ENST00000550164 GSAPA4D1B5 854 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 K7ERQ8 282 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 TSPAN9O75954 239 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 MTHFD2P13995 350 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 RGRP47804 291 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 DSTNP60981 165 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 RPS13P62277 151 aaKnown RBP9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 HNRNPA0Q13151 305 aaKnown RBP9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 E2F2Q14209 437 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 PCBP2Q15366 365 aaKnown RBP eCLIP9.88□□□□□ -0.838e-8■■■□□ 15.4
SMARCC2-209ENST00000550164 ANKRD34AQ69YU3 496 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 BHLHB9Q6PI77 547 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 AGTRAPQ6RW13 159 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 CEACAM20Q6UY09 585 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 MACC1Q6ZN28 852 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 OXR1Q8N573 874 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 SLC43A3Q8NBI5 491 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 RHOXF1Q8NHV9 184 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 UHRF1Q96T88 793 aaPredicted RBP9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 UCK2Q9BZX2 261 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 RHBGQ9H310 441 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 TP63Q9H3D4 680 aaPredicted RBP9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 SUV39H2Q9H5I1 410 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 TMEM30AQ9NV96 361 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 MCUBQ9NWR8 336 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 PGAP2Q9UHJ9 254 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 CLCA3PQ9Y6N3 262 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 HSPE1-MOB4S4R3N1 261 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 MBLAC1A4D2B0 266 aaPredicted RBP9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 MROH6A6NGR9 719 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 POP4O95707 220 aaKnown RBP9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 RPN2P04844 631 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 CSTF1Q05048 431 aaKnown RBP9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 MTAPQ13126 283 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 SMU1Q2TAY7 513 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 TXNDC8Q6A555 127 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 KIAA1161Q6NSJ0 714 aa9.88□□□□□ -0.83
SMARCC2-209ENST00000550164 Q6ZPB1 254 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms