RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 FATE1Q969F0 183 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 OR4K3Q96R72 315 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 TWNKQ96RR1 684 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 MCMBPQ9BTE3 642 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 ACOT13Q9NPJ3 140 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 POLE4Q9NR33 117 aa12.43□□□□□ -0.42
PTCH1-212ENST00000546744 PIGBOS1A0A0B4J2F0 54 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 TTC34A8MYJ7 566 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 FAAHO00519 579 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 CAPN5O15484 640 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-212ENST00000546744 KAT7O95251 611 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 SLC35G4P0C7Q5 338 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 EIF2S3P41091 472 aaKnown RBP12.42□□□□□ -0.42
PTCH1-212ENST00000546744 MAGEA6P43360 314 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 ACTC1P68032 377 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 ACTA1P68133 377 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 SNTB2Q13425 540 aaKnown RBP12.42□□□□□ -0.42
PTCH1-212ENST00000546744 CYBRD1Q53TN4 286 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 FAM171A1Q5VUB5 890 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 GPC2Q8N158 579 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 HDDC3Q8N4P3 179 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 ART5Q96L15 291 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 ACBD6Q9BR61 282 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 ZNF436Q9C0F3 470 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-212ENST00000546744 NUFIP1Q9UHK0 495 aaKnown RBP12.42□□□□□ -0.42
PTCH1-212ENST00000546744 OR10H1Q9Y4A9 318 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 SULT1C2O00338 296 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 DNAJB6O75190 326 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 NUDT14O95848 222 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 PAK4O96013 591 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-212ENST00000546744 ATXN8OSP0DMR3 200 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 PTPRAP18433 802 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 GGT1P19440 569 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 KDELR2P33947 212 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 INHBCP55103 352 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 NTRK2Q16620 822 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 CATSPERGQ6ZRH7 1159 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 SNX20Q7Z614 316 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 RNF130Q86XS8 419 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 KCNJ9Q92806 393 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 TSGA13Q96PP4 275 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 BRD7Q9NPI1 651 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 ACSS2Q9NR19 701 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 STYXL1Q9Y6J8 313 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 MYOCOSA0A1B0GUC4 107 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 A0A1B0GVM2 712 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 ABHD14A-ACY1A0A1B0GW23 586 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 C9IYK1 514 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 RB1P06400 928 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 HSD3B1P14060 373 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 ITPKAP23677 461 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 HSD3B2P26439 372 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 GSTM4Q03013 218 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 ZNF33BQ06732 778 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 SLC3A1Q07837 685 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 AIMP2Q13155 320 aaKnown RBP12.42□□□□□ -0.42
PTCH1-212ENST00000546744 SGCGQ13326 291 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 GALEQ14376 348 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 RPL13AP3Q6NVV1 102 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 FBXL19Q6PCT2 694 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 IGDCC3Q8IVU1 814 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 MS4A15Q8N5U1 240 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 FCAMRQ8WWV6 532 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 TMIGD2Q96BF3 282 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 TMEM74Q96NL1 305 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 RANBP9Q96S59 729 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 ZNF471Q9BX82 626 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-212ENST00000546744 CACNG6Q9BXT2 260 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 BHLHE41Q9C0J9 482 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-212ENST00000546744 FZD8Q9H461 694 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 ZNF334Q9HCZ1 680 aaPredicted RBP12.42□□□□□ -0.42
PTCH1-212ENST00000546744 MS4A12Q9NXJ0 267 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 CYTH4Q9UIA0 394 aa12.42□□□□□ -0.42
PTCH1-212ENST00000546744 INTS6Q9UL03 887 aaKnown RBP12.42□□□□□ -0.42
PTCH1-212ENST00000546744 LRRC14BA6NHZ5 514 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 PCDH7O60245 1069 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 TLR5O60602 858 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 OAZ2O95190 189 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 VNN2O95498 520 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 POMCP01189 267 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 G6PDP11413 515 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 ETV1P50549 477 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 TBCEQ15813 527 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-212ENST00000546744 MBOAT1Q6ZNC8 495 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 NPAS3Q8IXF0 933 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 TBC1D15Q8TC07 691 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 CDKN2AIPNLQ96HQ2 116 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 ARL6Q9H0F7 186 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 EXO5Q9H790 373 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 M0R036 132 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 VILLO15195 856 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 LYRM1O43325 122 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 OR10H2O60403 315 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 SIX3O95343 332 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-212ENST00000546744 C1RP00736 705 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 ALPPP05187 535 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 ZNF286BP0CG31 522 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 CHRNB1P11230 501 aa12.41□□□□□ -0.42
PTCH1-212ENST00000546744 JUNBP17275 347 aaPredicted RBP12.41□□□□□ -0.42
PTCH1-212ENST00000546744 DGKQP52824 942 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms