RNA–Protein interactions for RNA: ENST00000542420.6

SS18-205, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2 BASIC

Gene SS18, Length 2,321 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-205ENST00000542420 GTDC1Q4AE62 458 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 PDZD3Q86UT5 571 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 CLHC1Q8NHS4 586 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 NETO1Q8TDF5 533 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 CXorf40AQ8TE69 158 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 SLC5A11Q8WWX8 675 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 SORCS1Q8WY21 1168 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 RAD51AP1Q96B01 352 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 FBXL20Q96IG2 436 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 FAM129BQ96TA1 746 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 ARPC5LQ9BPX5 153 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 REEP4Q9H6H4 257 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 CCDC177Q9NQR7 707 aaPredicted RBP9.51□□□□□ -0.89
SS18-205ENST00000542420 SLC6A13Q9NSD5 602 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 THAP10Q9P2Z0 257 aaPredicted RBP9.51□□□□□ -0.89
SS18-205ENST00000542420 NAALAD2Q9Y3Q0 740 aa9.51□□□□□ -0.89
SS18-205ENST00000542420 M0QX08 132 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 ABCB7O75027 752 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 ANXA4P09525 319 aaPredicted RBP9.5□□□□□ -0.89
SS18-205ENST00000542420 NPPBP16860 134 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 DNAJA1P31689 397 aaKnown RBP9.5□□□□□ -0.89
SS18-205ENST00000542420 CDKN2CP42773 168 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 ITGA1P56199 1179 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 ERVK-21P61565 698 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 DUSP6Q16828 381 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 RAET1GQ6H3X3 334 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 OR2T5Q6IEZ7 315 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 CES5AQ6NT32 575 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 NXPE4Q6UWF7 544 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 Q6ZNX1 250 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 NUDT18Q6ZVK8 323 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 C12orf40Q86WS4 652 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 ZDHHC21Q8IVQ6 265 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 DCUN1D3Q8IWE4 304 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 KRT78Q8N1N4 520 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 METTL4Q8N3J2 472 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 OR2T29Q8NH02 315 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 HUS1BQ8NHY5 278 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 ZFP90Q8TF47 636 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 LRRC3BQ96PB8 259 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 TBCDQ9BTW9 1192 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 RHBGQ9H310 441 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 PIF1Q9H611 641 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 DMRT3Q9NQL9 472 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 AHSPQ9NZD4 102 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 GULP1Q9UBP9 304 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 PIPSLA2A3N6 862 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 CCDC160A6NGH7 325 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 PRRT4C9JH25 899 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 LZTS3O60299 673 aaPredicted RBP9.5□□□□□ -0.89
SS18-205ENST00000542420 NOBOXO60393 691 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 FABP3P05413 133 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 GSTM2P28161 218 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 PREPP48147 710 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 ARFIP1P53367 373 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 TMBIM6P55061 237 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 TAP2Q03519 686 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 VAC14Q08AM6 782 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 DMPKQ09013 629 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 ENPP2Q13822 863 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 ZNF234Q14588 700 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 HKDC1Q2TB90 917 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 ZNF691Q5VV52 312 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 XKR5Q6UX68 686 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 TMEM26Q6ZUK4 368 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 PTOV1Q86YD1 416 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 PHACTR4Q8IZ21 702 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 CHPFQ8IZ52 775 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 C1orf52Q8N6N3 182 aaKnown RBP9.5□□□□□ -0.89
SS18-205ENST00000542420 ZNF784Q8NCA9 323 aaPredicted RBP9.5□□□□□ -0.89
SS18-205ENST00000542420 RSPRY1Q96DX4 576 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 MED8Q96G25 268 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 MBOAT4Q96T53 435 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 EPYCQ99645 322 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 ING2Q9H160 280 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 OR52A5Q9H2C5 316 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 TOR3AQ9H497 397 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 TMEM38AQ9H6F2 299 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 TPT1P8Q9HAU6 139 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 ITGB1BP2Q9UKP3 347 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 ICKQ9UPZ9 632 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 PADI2Q9Y2J8 665 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 PCDHGB1Q9Y5G3 927 aa9.5□□□□□ -0.89
SS18-205ENST00000542420 E9PQ18 207 aa9.49□□□□□ -0.89
SS18-205ENST00000542420 H3BSA7 217 aa9.49□□□□□ -0.89
SS18-205ENST00000542420 CACNB4O00305 520 aaPredicted RBP9.49□□□□□ -0.89
SS18-205ENST00000542420 PCDH7O60245 1069 aa9.49□□□□□ -0.89
SS18-205ENST00000542420 FSHRP23945 695 aa9.49□□□□□ -0.89
SS18-205ENST00000542420 PCSK6P29122 969 aa9.49□□□□□ -0.89
SS18-205ENST00000542420 SLC5A2P31639 672 aa9.49□□□□□ -0.89
SS18-205ENST00000542420 CSNK2BP67870 215 aa9.49□□□□□ -0.89
SS18-205ENST00000542420 TEKQ02763 1124 aa9.49□□□□□ -0.89
SS18-205ENST00000542420 DCTN2Q13561 401 aaKnown RBP9.49□□□□□ -0.89
SS18-205ENST00000542420 CYP2A13Q16696 494 aa9.49□□□□□ -0.89
SS18-205ENST00000542420 TCEAL5Q5H9L2 206 aa9.49□□□□□ -0.89
SS18-205ENST00000542420 FAM78AQ5JUQ0 283 aa9.49□□□□□ -0.89
SS18-205ENST00000542420 OTUD3Q5T2D3 398 aaPredicted RBP9.49□□□□□ -0.89
SS18-205ENST00000542420 DCP2Q8IU60 420 aaKnown RBP9.49□□□□□ -0.89
SS18-205ENST00000542420 FAM86B1Q8N7N1 296 aa9.49□□□□□ -0.89
SS18-205ENST00000542420 OR7A2PQ8NGA2 310 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms