RNA–Protein interactions for RNA: ENST00000540638.6

EPB41L3-204, Transcript of erythrocyte membrane protein band 4.1 like 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene EPB41L3, Length 3,370 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41L3-204ENST00000540638 C1orf105O95561 183 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 EPHA2P29317 976 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 CDK9P50750 372 aaKnown RBP16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 SPIBQ01892 262 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 ELP6Q0PNE2 266 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 KCTD21Q4G0X4 260 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 ZCCHC7Q8N3Z6 543 aaKnown RBP16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 OR9A1PQ8NGU1 263 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 NFKBIDQ8NI38 313 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 HSPBAP1Q96EW2 488 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 F2RL3Q96RI0 385 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 CRISPLD2Q9H0B8 497 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 GORASP2Q9H8Y8 452 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 PRDM8Q9NQV8 689 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 KLHL20Q9Y2M5 609 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 TRPM6Q9BX84 2022 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 IGLV3-16A0A075B6K0 115 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 A0A1W2PP55 124 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 MID1O15344 667 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 TPST2O60704 377 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 CCNDBP1O95273 360 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 RRM2P31350 389 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 IL12RB1P42701 662 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 PRLHRP49683 370 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 NUDT6P53370 316 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 AHSA2Q719I0 299 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 ZNF551Q7Z340 670 aaPredicted RBP16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 RNF130Q86XS8 419 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 OR14C36Q8NHC7 312 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 GLMNQ92990 594 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 RPS6KA6Q9UK32 745 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 TMED5Q9Y3A6 229 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 PIPSLA2A3N6 862 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 KIAA0355O15063 1070 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 OR1F1O43749 312 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 AP2A2O94973 939 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 MAP2K4P45985 399 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 GAB1Q13480 694 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 COX20Q5RI15 118 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 PRAMEF14Q5SWL7 426 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 PRAMEF13Q5VWM6 474 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 GPR149Q86SP6 731 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 C17orf64Q86WR6 236 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 HDDC3Q8N4P3 179 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 TTC29Q8NA56 475 aaPredicted RBP16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 PIK3C3Q8NEB9 887 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 VANGL1Q8TAA9 524 aaPredicted RBP16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 ZFAND2BQ8WV99 257 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 GTPBP3Q969Y2 492 aaKnown RBP16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 LMLNQ96KR4 655 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 SLC6A17Q9H1V8 727 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 SZT2Q5T011 3432 aa16.44■□□□□ 0.22
EPB41L3-204ENST00000540638 PRUNE2Q8WUY3 3088 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 C1QTNF3-AMACRE9PGA6 284 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 J3QRK9 145 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 FGF19O95750 216 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 IL3P08700 152 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 SLC35G4P0C7Q5 338 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 HSMCR30P0CW71 290 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 HBA1P69905 142 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 ELAVL3Q14576 367 aaKnown RBP16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 TMIGD1Q6UXZ0 262 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 PRR23BQ6ZRT6 265 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 FAM83HQ6ZRV2 1179 aaPredicted RBP16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 SLC5A11Q8WWX8 675 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 CHFRQ96EP1 664 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 RHNO1Q9BSD3 238 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 YIPF4Q9BSR8 244 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 LGR4Q9BXB1 951 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 UPK1AO00322 258 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 SCAMP2O15127 329 aaKnown RBP16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 TIA1P31483 386 aaKnown RBP eCLIP16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 HNRNPA1L2Q32P51 320 aaKnown RBP16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 C6orf141Q5SZD1 244 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 TANGO2Q6ICL3 276 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 ERN2Q76MJ5 926 aaKnown RBP16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 HIPK1Q86Z02 1210 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 GOLM1Q8NBJ4 401 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 MTIF3Q9H2K0 278 aaKnown RBP16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 RAD18Q9NS91 495 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 THUMPD1Q9NXG2 353 aaKnown RBP16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 MYO10Q9HD67 2058 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 FAM220BPB1ANY3 271 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 MANFP55145 182 aaKnown RBP16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 DCTN2Q13561 401 aaKnown RBP16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 TECPR1Q7Z6L1 1165 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 DCP2Q8IU60 420 aaKnown RBP16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 C11orf65Q8NCR3 313 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 C12orf66Q96MD2 445 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 NODALQ96S42 347 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 OSBPL10Q9BXB5 764 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 RERGLQ9H628 205 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 CUEDC1Q9NWM3 386 aaPredicted RBP16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 SAGE1Q9NXZ1 904 aa16.43■□□□□ 0.22
EPB41L3-204ENST00000540638 COL4A4P53420 1690 aaPredicted RBP16.42■□□□□ 0.22
EPB41L3-204ENST00000540638 KCNE1BA0A087WTH5 132 aa16.42■□□□□ 0.22
EPB41L3-204ENST00000540638 PSIP1O75475 530 aaKnown RBP16.42■□□□□ 0.22
EPB41L3-204ENST00000540638 KCNK5O95279 499 aa16.42■□□□□ 0.22
EPB41L3-204ENST00000540638 BCL10O95999 233 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms