RNA–Protein interactions for RNA: ENST00000539338.6

CACNB1-206, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best)

Gene CACNB1, Length 5,308 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-206ENST00000539338 WNT6Q9Y6F9 365 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 H1F0P07305 194 aaKnown RBP14.09□□□□□ -0.15
CACNB1-206ENST00000539338 CSNK2A2P19784 350 aaPredicted RBP14.09□□□□□ -0.15
CACNB1-206ENST00000539338 HSF2Q03933 536 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 TNFAIP8L3Q5GJ75 292 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 SMYD5Q6GMV2 418 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 CEACAM20Q6UY09 585 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 KBTBD6Q86V97 674 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 IGSF8Q969P0 613 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 IMP4Q96G21 291 aaKnown RBP14.09□□□□□ -0.15
CACNB1-206ENST00000539338 HCN3Q9P1Z3 774 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 APBB3O95704 486 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 CHRNA1P02708 482 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 PSKH1P11801 424 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 ELK4P28324 431 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 PTGR1Q14914 329 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 TSTQ16762 297 aaKnown RBP14.09□□□□□ -0.15
CACNB1-206ENST00000539338 C22orf39Q6P5X5 142 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 KLHDC7BQ96G42 594 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 PAAF1Q9BRP4 392 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 TXLNGYQ9BZA5 131 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 PLAGL1Q9UM63 463 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 MMP20O60882 483 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 GSCP56915 257 aaPredicted RBP14.09□□□□□ -0.15
CACNB1-206ENST00000539338 KLHL24Q6TFL4 600 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 CCDC80Q76M96 950 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 SERINC5Q86VE9 423 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 ZDHHC14Q8IZN3 488 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 AQP11Q8NBQ7 271 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 NEK7Q8TDX7 302 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 LMAN1LQ9HAT1 526 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 FTSJ1Q9UET6 329 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 KLF15Q9UIH9 416 aa14.09□□□□□ -0.15
CACNB1-206ENST00000539338 GJB5O95377 273 aa14.08□□□□□ -0.15
CACNB1-206ENST00000539338 SOX14O95416 240 aa14.08□□□□□ -0.15
CACNB1-206ENST00000539338 PRAMEF12O95522 483 aa14.08□□□□□ -0.15
CACNB1-206ENST00000539338 OR2B6P58173 313 aa14.08□□□□□ -0.15
CACNB1-206ENST00000539338 SPRED3Q2MJR0 410 aa14.08□□□□□ -0.15
CACNB1-206ENST00000539338 ADNP2Q6IQ32 1131 aa14.08□□□□□ -0.15
CACNB1-206ENST00000539338 SUSD1Q6UWL2 747 aa14.08□□□□□ -0.15
CACNB1-206ENST00000539338 DCAF4L2Q8NA75 395 aa14.08□□□□□ -0.15
CACNB1-206ENST00000539338 ZUFSPQ96AP4 578 aa14.08□□□□□ -0.15
CACNB1-206ENST00000539338 MRPL38Q96DV4 380 aaKnown RBP14.08□□□□□ -0.15
CACNB1-206ENST00000539338 MARCH4Q9P2E8 410 aaPredicted RBP14.08□□□□□ -0.15
CACNB1-206ENST00000539338 RHCGQ9UBD6 479 aa14.08□□□□□ -0.15
CACNB1-206ENST00000539338 INSL5Q9Y5Q6 135 aa14.08□□□□□ -0.15
CACNB1-206ENST00000539338 PHRF1Q9P1Y6 1649 aaKnown RBP14.08□□□□□ -0.16
CACNB1-206ENST00000539338 UPK3BL1B0FP48 263 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 UPK3BL2E5RIL1 263 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 NDUFS4O43181 175 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 AHCYP23526 432 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 DNASE1L1P49184 302 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 CEACAM7Q14002 265 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 TCEAL5Q5H9L2 206 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 TMEM135Q86UB9 458 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 GRHL3Q8TE85 626 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 CRYGNQ8WXF5 182 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 C1orf74Q96LT6 269 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 STRA6Q9BX79 667 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.08□□□□□ -0.16
CACNB1-206ENST00000539338 CDH7Q9ULB5 785 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 CFL2Q9Y281 166 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 PDE4DIPQ5VU43 2346 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 INMTO95050 263 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 SNAP29O95721 258 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 C6orf47O95873 294 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 GRK6P43250 576 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 ATP4BP51164 291 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 ARSFP54793 590 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 EIPR1Q53HC9 387 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 UNC50Q53HI1 259 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 SYVN1Q86TM6 617 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 NPAS3Q8IXF0 933 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 HCAR2Q8TDS4 363 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 TNFAIP8L1Q8WVP5 186 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 CMTM7Q96FZ5 175 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 HERC2P3Q9BVR0 1158 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 B4GALT6Q9UBX8 382 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 ORC5O43913 435 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 CH25HO95992 272 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 ADH1BP00325 375 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 EPOP01588 193 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 NIPAL4Q0D2K0 466 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 LMAN2Q12907 356 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 ENPP7Q6UWV6 458 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 KBTBD7Q8WVZ9 684 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 MUS81Q96NY9 551 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 UTS2RQ9UKP6 389 aa14.08□□□□□ -0.16
CACNB1-206ENST00000539338 MAFKO60675 156 aa14.07□□□□□ -0.16
CACNB1-206ENST00000539338 CLPXO76031 633 aa14.07□□□□□ -0.16
CACNB1-206ENST00000539338 DRD1P21728 446 aa14.07□□□□□ -0.16
CACNB1-206ENST00000539338 TXNL4AP83876 142 aaKnown RBP14.07□□□□□ -0.16
CACNB1-206ENST00000539338 TDGQ13569 410 aa14.07□□□□□ -0.16
CACNB1-206ENST00000539338 CYP27C1Q4G0S4 372 aa14.07□□□□□ -0.16
CACNB1-206ENST00000539338 TPRG1LQ5T0D9 272 aa14.07□□□□□ -0.16
CACNB1-206ENST00000539338 OR10T2Q8NGX3 314 aa14.07□□□□□ -0.16
CACNB1-206ENST00000539338 ZNF461Q8TAF7 563 aa14.07□□□□□ -0.16
CACNB1-206ENST00000539338 C9orf43Q8TAL5 461 aaPredicted RBP14.07□□□□□ -0.16
CACNB1-206ENST00000539338 FAM120CQ9NX05 1096 aaKnown RBP14.07□□□□□ -0.16
CACNB1-206ENST00000539338 TMEM98Q9Y2Y6 226 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms