RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 INCA1Q0VD86 236 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 PLCZ1Q86YW0 608 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 CCDC107Q8WV48 283 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 GAL3ST3Q96A11 431 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 KCNC2Q96PR1 638 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 CMKLR1Q99788 373 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 SGIP1Q9BQI5 828 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 CD320Q9NPF0 282 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 C5orf51A6NDU8 294 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 ARPC2O15144 300 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 LDB2O43679 373 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 SHOX2O60902 331 aaPredicted RBP16.3■□□□□ 0.2
SCARB1-205ENST00000538291 KHDC1Q4VXA5 237 aaKnown RBP16.3■□□□□ 0.2
SCARB1-205ENST00000538291 ZNF805Q5CZA5 627 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 PLEKHS1Q5SXH7 462 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 Q6ZVL8 140 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 NPAS3Q8IXF0 933 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 C15orf40Q8WUR7 153 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 LRRC46Q96FV0 321 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 AMBNQ9NP70 447 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 EFCAB9A8MZ26 197 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 H0YJX3 145 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 TXNRD3NBQ6F5E7 133 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 ZNF783Q6ZMS7 281 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 CPNE8Q86YQ8 564 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 SLCO2A1Q92959 643 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 KIAA1191Q96A73 305 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 GPR22Q99680 433 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 UCK2Q9BZX2 261 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 ST6GALNAC1Q9NSC7 600 aaPredicted RBP16.3■□□□□ 0.2
SCARB1-205ENST00000538291 NLE1Q9NVX2 485 aaPredicted RBP16.3■□□□□ 0.2
SCARB1-205ENST00000538291 SUSD2Q9UGT4 822 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 KCTD3Q9Y597 815 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 MATN1P21941 496 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 CREB5Q02930 508 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 CBLBQ13191 982 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 RBM20Q5T481 1227 aaKnown RBP16.3■□□□□ 0.2
SCARB1-205ENST00000538291 ASB9Q96DX5 294 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 SPHK2Q9NRA0 654 aa16.3■□□□□ 0.2
SCARB1-205ENST00000538291 TP53I11O14683 189 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 ELOAQ14241 798 aaKnown RBP16.29■□□□□ 0.2
SCARB1-205ENST00000538291 ZNF267Q14586 743 aaPredicted RBP16.29■□□□□ 0.2
SCARB1-205ENST00000538291 NPY5RQ15761 445 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 CYP27C1Q4G0S4 372 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 MSANTD1Q6ZTZ1 278 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 JAGN1Q8N5M9 183 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 THEM6Q8WUY1 208 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 LRIG1Q96JA1 1093 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 MAPKAP1Q9BPZ7 522 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 GRHPRQ9UBQ7 328 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 WASF3Q9UPY6 502 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 MED1Q15648 1581 aaPredicted RBP16.29■□□□□ 0.2
SCARB1-205ENST00000538291 LTBP3Q9NS15 1303 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 HCRTO43612 131 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 RAB36O95755 333 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 EPOP01588 193 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 CFHP08603 1231 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 CSTF1Q05048 431 aaKnown RBP16.29■□□□□ 0.2
SCARB1-205ENST00000538291 RBM48Q5RL73 367 aaKnown RBP16.29■□□□□ 0.2
SCARB1-205ENST00000538291 OGFOD2Q6N063 350 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 ARL9Q6T311 187 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 WDR92Q96MX6 357 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 TPT1P8Q9HAU6 139 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 PRODH2Q9UF12 536 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 WDR45Q9Y484 360 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 METTL21EPA6NDL7 271 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 ARL6IP5O75915 188 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 SYNGR4O95473 234 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 SNAI1O95863 264 aaPredicted RBP16.29■□□□□ 0.2
SCARB1-205ENST00000538291 ITGA5P08648 1049 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 AQP4P55087 323 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 SLC25A11Q02978 314 aaKnown RBP16.29■□□□□ 0.2
SCARB1-205ENST00000538291 SUSD1Q6UWL2 747 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 CILP2Q8IUL8 1156 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 NAT14Q8WUY8 206 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 TM9SF2Q99805 663 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 MRM3Q9HC36 420 aaKnown RBP16.29■□□□□ 0.2
SCARB1-205ENST00000538291 TRIM36Q9NQ86 728 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 SPATA6Q9NWH7 488 aaPredicted RBP16.29■□□□□ 0.2
SCARB1-205ENST00000538291 MS4A12Q9NXJ0 267 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 OR5K4A6NMS3 321 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 CXorf49A8MYA2 514 aaPredicted RBP16.29■□□□□ 0.2
SCARB1-205ENST00000538291 LEFTY1O75610 366 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 CREB1P16220 341 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 EIF1AXP47813 144 aaKnown RBP16.29■□□□□ 0.2
SCARB1-205ENST00000538291 RPL6Q02878 288 aaKnown RBP16.29■□□□□ 0.2
SCARB1-205ENST00000538291 MERTKQ12866 999 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 ZDHHC24Q6UX98 284 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 FAM86B1Q8N7N1 296 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 KCNJ9Q92806 393 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 MMABQ96EY8 250 aaPredicted RBP16.29■□□□□ 0.2
SCARB1-205ENST00000538291 CD244Q9BZW8 370 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 PCDHB16Q9NRJ7 776 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 GIN1Q9NXP7 522 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 CYTH4Q9UIA0 394 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 MAU2Q9Y6X3 613 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 BLOC1S5-TXNDC5H3BN57 136 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 MAN2B1O00754 1011 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 COCHO43405 550 aa16.29■□□□□ 0.2
SCARB1-205ENST00000538291 NSUN3Q9H649 340 aaKnown RBP16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms