RNA–Protein interactions for RNA: ENST00000537634.1

CHD4-207, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 691 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-207ENST00000537634 ABI3Q9P2A4 366 aa9.15□□□□□ -0.94
CHD4-207ENST00000537634 SUCOQ9UBS9 1254 aaKnown RBP9.15□□□□□ -0.94
CHD4-207ENST00000537634 ASIC3Q9UHC3 531 aa9.15□□□□□ -0.94
CHD4-207ENST00000537634 SH2B3Q9UQQ2 575 aa9.15□□□□□ -0.94
CHD4-207ENST00000537634 MYO9AB2RTY4 2548 aa9.15□□□□□ -0.94
CHD4-207ENST00000537634 SCN3AQ9NY46 2000 aa9.15□□□□□ -0.94
CHD4-207ENST00000537634 PRSS44E7EML9 344 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 SLC16A5O15375 505 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 HNRNPRO43390 633 aaKnown RBP9.14□□□□□ -0.95
CHD4-207ENST00000537634 RDH16O75452 317 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 UNC5CO95185 931 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 CCR8P51685 355 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 CDKN2DP55273 166 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 IL2P60568 153 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 SKP1P63208 163 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 DHX9Q08211 1270 aaKnown RBP9.14□□□□□ -0.95
CHD4-207ENST00000537634 PDAP1Q13442 181 aaKnown RBP9.14□□□□□ -0.95
CHD4-207ENST00000537634 NAA30Q147X3 362 aaPredicted RBP9.14□□□□□ -0.95
CHD4-207ENST00000537634 EXT1Q16394 746 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 PHKG1Q16816 387 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 SPANXN3Q5MJ09 141 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 RBM20Q5T481 1227 aaKnown RBP9.14□□□□□ -0.95
CHD4-207ENST00000537634 CAPN13Q6MZZ7 669 aaPredicted RBP9.14□□□□□ -0.95
CHD4-207ENST00000537634 PAQR3Q6TCH7 311 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 LCTLQ6UWM7 567 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 TMEM207Q6UWW9 146 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 KIAA0408Q6ZU52 694 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 ANKRD37Q7Z713 158 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 SLC26A11Q86WA9 606 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 BEST3Q8N1M1 668 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 TBC1D19Q8N5T2 526 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 DNAJB8Q8NHS0 232 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 ACTRT1Q8TDG2 376 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 RELTQ969Z4 430 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 MARVELD3Q96A59 401 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 TM4SF19Q96DZ7 209 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 ZNF354BQ96LW1 612 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 OSBPL9Q96SU4 736 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 NAT9Q9BTE0 207 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 SGPP1Q9BX95 441 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 RBCK1Q9BYM8 510 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 TRIM54Q9BYV2 358 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 KCNK13Q9HB14 408 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 ARL15Q9NXU5 204 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 COPG2Q9UBF2 871 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 SEC14L3Q9UDX4 400 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 ENTPD4Q9Y227 616 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 NAALAD2Q9Y3Q0 740 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 SLC22A7Q9Y694 548 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 CREBBPQ92793 2442 aa9.14□□□□□ -0.95
CHD4-207ENST00000537634 TRGV8A0A0C4DH27 118 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 ARHGAP10A1A4S6 786 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 OR2W5A6NFC9 320 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 ZNF860A6NHJ4 632 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 DNALI1O14645 258 aaPredicted RBP9.13□□□□□ -0.95
CHD4-207ENST00000537634 NDUFS4O43181 175 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 BANF1O75531 89 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 CDC123O75794 336 aaPredicted RBP9.13□□□□□ -0.95
CHD4-207ENST00000537634 AHSGP02765 367 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 IL10P22301 178 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 MST1P26927 711 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 AP1S2P56377 157 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 TIAL1Q01085 375 aaKnown RBP eCLIP9.13□□□□□ -0.95
CHD4-207ENST00000537634 PMP22Q01453 160 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 MEF2AQ02078 507 aaPredicted RBP9.13□□□□□ -0.95
CHD4-207ENST00000537634 RBPJQ06330 500 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 ACTN3Q08043 901 aaPredicted RBP9.13□□□□□ -0.95
CHD4-207ENST00000537634 ABRAXAS2Q15018 415 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 HERC3Q15034 1050 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 NSDHLQ15738 373 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 MEP1AQ16819 746 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.13□□□□□ -0.95
CHD4-207ENST00000537634 SFT2D3Q587I9 215 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 ZNF766Q5HY98 468 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 ACER2Q5QJU3 275 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 DUPD1Q68J44 220 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 FCRLBQ6BAA4 426 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 MTFR2Q6P444 385 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 PAPD4Q6PIY7 484 aaKnown RBP9.13□□□□□ -0.95
CHD4-207ENST00000537634 PCGF5Q86SE9 256 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 PDSS2Q86YH6 399 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 TICAM1Q8IUC6 712 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 CNTN4Q8IWV2 1026 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 AMER2Q8N7J2 671 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 GPATCH11Q8N954 259 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 MFSD9Q8NBP5 474 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 ATL1Q8WXF7 558 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 PYCR2Q96C36 320 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 CERS2Q96G23 380 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 PEX11GQ96HA9 241 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 OR1F2PQ96R84 312 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 LPAR4Q99677 370 aa9.13□□□□□ -0.95
CHD4-207ENST00000537634 PPANQ9NQ55 473 aaKnown RBP9.13□□□□□ -0.95
CHD4-207ENST00000537634 NBPF19A0A087WUL8 3843 aa9.12□□□□□ -0.95
CHD4-207ENST00000537634 TRBC2A0A5B9 178 aa9.12□□□□□ -0.95
CHD4-207ENST00000537634 MAGEB17A8MXT2 336 aa9.12□□□□□ -0.95
CHD4-207ENST00000537634 CCL21O00585 134 aa9.12□□□□□ -0.95
CHD4-207ENST00000537634 TTI1O43156 1089 aa9.12□□□□□ -0.95
CHD4-207ENST00000537634 OR1F1O43749 312 aa9.12□□□□□ -0.95
CHD4-207ENST00000537634 LCMT2O60294 686 aaKnown RBP9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms