RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 UPK1AO00322 258 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 SERPINA1P01009 418 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 PCCBP05166 539 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 ALPLP05186 524 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 LAMP2P13473 410 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 IDSP22304 550 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 TTKP33981 857 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 ADARB1P78563 741 aaKnown RBP13.06□□□□□ -0.32
SMG6-203ENST00000536871 RBBP4Q09028 425 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 WSCD2Q2TBF2 565 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 SLC44A4Q53GD3 710 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 XKR5Q6UX68 686 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 USP51Q70EK9 711 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 PAGE2Q7Z2X7 111 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 GPR155Q7Z3F1 870 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 ANKRD46Q86W74 232 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 PHACTR4Q8IZ21 702 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 HDDC3Q8N4P3 179 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 FAM110BQ8TC76 370 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 ADAMTS16Q8TE57 1224 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 CYGBQ8WWM9 190 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 FAM131CQ96AQ9 280 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 PBX4Q9BYU1 374 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 RHBGQ9H310 441 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 CAAP1Q9H8G2 361 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 CERS4Q9HA82 394 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 TPT1P8Q9HAU6 139 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 C3orf18Q9UK00 162 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 KRT87PA6NCN2 255 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 TRIM64CA6NLI5 447 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 GABRR3A8MPY1 467 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 MID1O15344 667 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 PGM3O95394 542 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 THRBP10828 461 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 MYCLP1P12525 358 aaPredicted RBP13.06□□□□□ -0.32
SMG6-203ENST00000536871 GSTM2P28161 218 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 TPP2P29144 1249 aaPredicted RBP13.06□□□□□ -0.32
SMG6-203ENST00000536871 CDKN2CP42773 168 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 RAD23AP54725 363 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 ESRRGP62508 458 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 SGCGQ13326 291 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 PDE7AQ13946 482 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 CNPY1Q3B7I2 92 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 CYBRD1Q53TN4 286 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 ZC3H12BQ5HYM0 836 aaKnown RBP13.06□□□□□ -0.32
SMG6-203ENST00000536871 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP13.06□□□□□ -0.32
SMG6-203ENST00000536871 STK32CQ86UX6 486 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 SLC30A8Q8IWU4 369 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.06□□□□□ -0.32
SMG6-203ENST00000536871 NUDT8Q8WV74 236 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 ASB12Q8WXK4 309 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 GFM2Q969S9 779 aaKnown RBP13.06□□□□□ -0.32
SMG6-203ENST00000536871 NRBF2Q96F24 287 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 NKX2-4Q9H2Z4 354 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 WASH6PQ9NQA3 447 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 ITGB1BP2Q9UKP3 347 aa13.06□□□□□ -0.32
SMG6-203ENST00000536871 PLK4O00444 970 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 TBX19O60806 448 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 KCNK5O95279 499 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 ETHE1O95571 254 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 CPSF4O95639 269 aaKnown RBP13.05□□□□□ -0.32
SMG6-203ENST00000536871 GSNP06396 782 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 LAMP1P11279 417 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 SOX11P35716 441 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 CCR8P51685 355 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 TAS2R38P59533 333 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 VAC14Q08AM6 782 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 FADDQ13158 208 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 IL18R1Q13478 541 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 TSTA3Q13630 321 aaPredicted RBP13.05□□□□□ -0.32
SMG6-203ENST00000536871 GK3PQ14409 553 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 CATSPEREQ5SY80 951 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 CCNYL2Q5T2Q4 361 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 ZCCHC8Q6NZY4 707 aaKnown RBP13.05□□□□□ -0.32
SMG6-203ENST00000536871 ENPP6Q6UWR7 440 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 EIF3MQ7L2H7 374 aaKnown RBP13.05□□□□□ -0.32
SMG6-203ENST00000536871 COMMD6Q7Z4G1 85 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 SATL1Q86VE3 508 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 FAM129CQ86XR2 697 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 ZZZ3Q8IYH5 903 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 PLA2G15Q8NCC3 412 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 ZNF555Q8NEP9 628 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 ABHD11Q8NFV4 315 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 PJA1Q8NG27 643 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 TTLQ8NG68 377 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 NETO1Q8TDF5 533 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 FOXJ1Q92949 421 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 PPCDCQ96CD2 204 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 ZNF764Q96H86 408 aaPredicted RBP13.05□□□□□ -0.32
SMG6-203ENST00000536871 MYADMQ96S97 322 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 C1QTNF2Q9BXJ5 285 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 IL1RAPQ9NPH3 570 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 SLC6A13Q9NSD5 602 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 DDX18Q9NVP1 670 aaKnown RBP13.05□□□□□ -0.32
SMG6-203ENST00000536871 GALNT8Q9NY28 637 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 HCN2Q9UL51 889 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 TMEM98Q9Y2Y6 226 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 AK5Q9Y6K8 562 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 V9GYQ6 96 aa13.05□□□□□ -0.32
SMG6-203ENST00000536871 ANKDD1BA6NHY2 528 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms