RNA–Protein interactions for RNA: ENST00000536079.5

DDX55-204, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 765 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-204ENST00000536079 XKR6Q5GH73 641 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 YOD1Q5VVQ6 348 aaPredicted RBP17.01■□□□□ 0.31
DDX55-204ENST00000536079 MLIPQ5VWP3 458 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 TMEM214Q6NUQ4 689 aaKnown RBP17.01■□□□□ 0.31
DDX55-204ENST00000536079 MRPL14Q6P1L8 145 aaKnown RBP17.01■□□□□ 0.31
DDX55-204ENST00000536079 GOLGA7Q7Z5G4 137 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.01■□□□□ 0.31
DDX55-204ENST00000536079 C4orf33Q8N1A6 199 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 WDR34Q96EX3 536 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 AIF1LQ9BQI0 150 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 NLNQ9BYT8 704 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 KLHL31Q9H511 634 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 PPCSQ9HAB8 311 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 OPTCQ9UBM4 332 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 CTSFQ9UBX1 484 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 SEC16AO15027 2179 aa17.01■□□□□ 0.31
DDX55-204ENST00000536079 A8MT66 165 aa17■□□□□ 0.31
DDX55-204ENST00000536079 C4orf51C9J302 202 aa17■□□□□ 0.31
DDX55-204ENST00000536079 CLGNO14967 610 aa17■□□□□ 0.31
DDX55-204ENST00000536079 DLX3O60479 287 aa17■□□□□ 0.31
DDX55-204ENST00000536079 CREG1O75629 220 aa17■□□□□ 0.31
DDX55-204ENST00000536079 WFS1O76024 890 aa17■□□□□ 0.31
DDX55-204ENST00000536079 RAB40ALP0C0E4 278 aa17■□□□□ 0.31
DDX55-204ENST00000536079 GRK3P35626 688 aa17■□□□□ 0.31
DDX55-204ENST00000536079 EMP3P54852 163 aa17■□□□□ 0.31
DDX55-204ENST00000536079 ZNF844Q08AG5 666 aa17■□□□□ 0.31
DDX55-204ENST00000536079 SYT16Q17RD7 645 aa17■□□□□ 0.31
DDX55-204ENST00000536079 MUM1Q2TAK8 710 aa17■□□□□ 0.31
DDX55-204ENST00000536079 GPR155Q7Z3F1 870 aa17■□□□□ 0.31
DDX55-204ENST00000536079 PDSS2Q86YH6 399 aa17■□□□□ 0.31
DDX55-204ENST00000536079 AMER3Q8N944 861 aa17■□□□□ 0.31
DDX55-204ENST00000536079 ZCCHC10Q8TBK6 192 aa17■□□□□ 0.31
DDX55-204ENST00000536079 DPH2Q9BQC3 489 aaPredicted RBP17■□□□□ 0.31
DDX55-204ENST00000536079 GPR87Q9BY21 358 aa17■□□□□ 0.31
DDX55-204ENST00000536079 IFT80Q9P2H3 777 aaPredicted RBP17■□□□□ 0.31
DDX55-204ENST00000536079 LGALS13Q9UHV8 139 aa17■□□□□ 0.31
DDX55-204ENST00000536079 ZFP69BQ9UJL9 534 aa17■□□□□ 0.31
DDX55-204ENST00000536079 LHX6Q9UPM6 363 aa17■□□□□ 0.31
DDX55-204ENST00000536079 PCSK5Q92824 1860 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 A0A1B0GTL3 188 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 ZNF891A8MT65 544 aaPredicted RBP16.99■□□□□ 0.31
DDX55-204ENST00000536079 PPP6CO00743 305 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 NDUFS4O43181 175 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 SERPIND1P05546 499 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 CREB1P16220 341 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 CASP2P42575 452 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 RPS15P62841 145 aaKnown RBP16.99■□□□□ 0.31
DDX55-204ENST00000536079 MAT1AQ00266 395 aaKnown RBP16.99■□□□□ 0.31
DDX55-204ENST00000536079 SLC18A2Q05940 514 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 PCDH1Q08174 1060 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 IFFO1Q0D2I5 559 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 CDC20Q12834 499 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 GTF2H2Q13888 395 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 E2F2Q14209 437 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 GARNL3Q5VVW2 1013 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 GTF2H2CQ6P1K8 395 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 SHISA6Q6ZSJ9 500 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 OVCH1Q7RTY7 1134 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 TRABD2AQ86V40 505 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 IQCKQ8N0W5 287 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 CAMKVQ8NCB2 501 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 OR9A4Q8NGU2 314 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 NT5CQ8TCD5 201 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 PTCD3Q96EY7 689 aaKnown RBP16.99■□□□□ 0.31
DDX55-204ENST00000536079 EFHD1Q9BUP0 239 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 TMEM109Q9BVC6 243 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 EHD1Q9H4M9 534 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 ZBTB26Q9HCK0 441 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 COPG2Q9UBF2 871 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 KCND3Q9UK17 655 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 PCTPQ9UKL6 214 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 TCFL5Q9UL49 500 aa16.99■□□□□ 0.31
DDX55-204ENST00000536079 STX16-NPEPL1H3BU86 382 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 SGK494L7N484 410 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 OR7A17O14581 309 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 STX16O14662 325 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 SMIM24O75264 130 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 H2AFYO75367 372 aaKnown RBP16.98■□□□□ 0.31
DDX55-204ENST00000536079 UMODP07911 640 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 GSTA1P08263 222 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 EPB42P16452 691 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 IL1RNP18510 177 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 KRT4P19013 534 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 TSPAN8P19075 237 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 AHRP35869 848 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 HNF4AP41235 474 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 IRF8Q02556 426 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 TBCCQ15814 346 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 PCSK4Q6UW60 755 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 TMIGD1Q6UXZ0 262 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 RNF175Q8N4F7 328 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 COL26A1Q96A83 441 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 MMABQ96EY8 250 aaPredicted RBP16.98■□□□□ 0.31
DDX55-204ENST00000536079 ZIM3Q96PE6 472 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 CDK15Q96Q40 435 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 MESP1Q9BRJ9 268 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 CAPS2Q9BXY5 557 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 ROPN1BQ9BZX4 212 aaPredicted RBP16.98■□□□□ 0.31
DDX55-204ENST00000536079 SLC6A16Q9GZN6 736 aa16.98■□□□□ 0.31
DDX55-204ENST00000536079 DRC3Q9H069 523 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms