RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 GNG14A0A1W2PPG7 69 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 MGAT4DA6NG13 374 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 C1QTNF3-AMACRE9PGA6 284 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 VEGFDO43915 354 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 NOBOXO60393 691 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 ABCB7O75027 752 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 EPN2O95208 641 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 GBAP04062 536 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 C1GALT1C1LP0DN25 315 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 PBX2P40425 430 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 VAC14Q08AM6 782 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 RUNX3Q13761 415 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 C16orf72Q14CZ0 275 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 GALNT10Q86SR1 603 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 EID3Q8N140 333 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 ZCCHC7Q8N3Z6 543 aaKnown RBP12.87□□□□□ -0.35
VPS33B-202ENST00000535906 OR5K1Q8NHB7 308 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 WDR34Q96EX3 536 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 COX14Q96I36 57 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 IL17FQ96PD4 163 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 NRTNQ99748 197 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 DPH2Q9BQC3 489 aaPredicted RBP12.87□□□□□ -0.35
VPS33B-202ENST00000535906 TRPM6Q9BX84 2022 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 LGR4Q9BXB1 951 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 PLA2G2FQ9BZM2 168 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 AMBRA1Q9C0C7 1298 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 OR52A5Q9H2C5 316 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 PLGRKTQ9HBL7 147 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 SLC23A2Q9UGH3 650 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 EXO1Q9UQ84 846 aaKnown RBP12.87□□□□□ -0.35
VPS33B-202ENST00000535906 DYRK1BQ9Y463 629 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 PCDHGA8Q9Y5G5 932 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 PIPSLA2A3N6 862 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 SAP18O00422 153 aaKnown RBP12.87□□□□□ -0.35
VPS33B-202ENST00000535906 PCDH7O60245 1069 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 SEC14L2O76054 403 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 CCNDBP1O95273 360 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 TGFB1P01137 390 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 IDSP22304 550 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 PRKACGP22612 351 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 TIA1P31483 386 aaKnown RBP eCLIP12.87□□□□□ -0.35
VPS33B-202ENST00000535906 DRD3P35462 400 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 ASMTP46597 345 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 PNLIPRP1P54315 467 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 SPIDRQ14159 915 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 CPTPQ5TA50 214 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 SPESP1Q6UW49 350 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 R3HCC1LQ7Z5L2 792 aaKnown RBP12.87□□□□□ -0.35
VPS33B-202ENST00000535906 DSG4Q86SJ6 1040 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 HEATR4Q86WZ0 1026 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 PTOV1Q86YD1 416 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 LAS2Q8IYD9 372 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 ZZZ3Q8IYH5 903 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 C2orf73Q8N5S3 287 aaPredicted RBP12.87□□□□□ -0.35
VPS33B-202ENST00000535906 ZNF740Q8NDX6 193 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 OR5AR1Q8NGP9 310 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 NAA50Q9GZZ1 169 aaKnown RBP12.87□□□□□ -0.35
VPS33B-202ENST00000535906 ADNPQ9H2P0 1102 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 IGFLR1Q9H665 355 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 LTB4R2Q9NPC1 389 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 ITM2CQ9NQX7 267 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 OBP2AQ9NY56 170 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 PLAGL1Q9UM63 463 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 ASF1AQ9Y294 204 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 U3KQV3 271 aa12.87□□□□□ -0.35
VPS33B-202ENST00000535906 A0A1W2PPW3 197 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 IGLON5A6NGN9 336 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 TMX2-CTNND1H3BSU7 103 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 KAT7O95251 611 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 ZNF682O95780 498 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 PIGAP37287 484 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 DCTP40126 519 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 WASP42768 502 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 GALK1P51570 392 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 TMBIM6P55061 237 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 FCHO2Q0JRZ9 810 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 TUBA3CQ13748 450 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 SKIV2LQ15477 1246 aaKnown RBP12.86□□□□□ -0.35
VPS33B-202ENST00000535906 VMACQ2NL98 169 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 XAF1Q6GPH4 301 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 PNCKQ6P2M8 343 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 GALNT18Q6P9A2 607 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 ARMCX6Q7L4S7 300 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 CHPFQ8IZ52 775 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 SLC5A11Q8WWX8 675 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 LZICQ8WZA0 190 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 REPS1Q96D71 796 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 THAP11Q96EK4 314 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 EFCAB11Q9BUY7 163 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 OR51B5Q9H339 312 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 TPT1P8Q9HAU6 139 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 FANCEQ9HB96 536 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 TM7SF3Q9NS93 570 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 GALNT8Q9NY28 637 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 C3orf18Q9UK00 162 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 FAF1Q9UNN5 650 aaPredicted RBP12.86□□□□□ -0.35
VPS33B-202ENST00000535906 PCDHB11Q9Y5F2 797 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 DOCK8Q8NF50 2099 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 MYO9BQ13459 2157 aa12.86□□□□□ -0.35
VPS33B-202ENST00000535906 FOXE1O00358 373 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms