RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 SBSNQ6UWP8 590 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 TMEM207Q6UWW9 146 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 IGFL3Q6UXB1 125 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 ISLR2Q6UXK2 745 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 FRA10AC1Q70Z53 315 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 CUZD1Q86UP6 607 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 SHISA5Q8N114 240 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 ARHGEF39Q8N4T4 335 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 NKAPQ8N5F7 415 aaKnown RBP9.89□□□□□ -0.83
CAPN1-225ENST00000533704 TBC1D19Q8N5T2 526 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 SIRT6Q8N6T7 355 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 MFSD9Q8NBP5 474 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 OR56A3Q8NH54 315 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 OR51Q1Q8NH59 317 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 DNAJB14Q8TBM8 379 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 METTL21AQ8WXB1 218 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 CDKL2Q92772 493 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 SNRNP40Q96DI7 357 aaKnown RBP9.89□□□□□ -0.83
CAPN1-225ENST00000533704 VPS39Q96JC1 886 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 MAGEB10Q96LZ2 347 aaPredicted RBP9.89□□□□□ -0.83
CAPN1-225ENST00000533704 OR4K3Q96R72 315 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 RHOJQ9H4E5 214 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 SMYD2Q9NRG4 433 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 RIC8BQ9NVN3 520 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 NSMCE4AQ9NXX6 385 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 MOCS1Q9NZB8 636 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 WHRNQ9P202 907 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 PTGFRNQ9P2B2 879 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 TXNDC16Q9P2K2 825 aa9.89□□□□□ -0.83
CAPN1-225ENST00000533704 COPG1Q9Y678 874 aaKnown RBP9.89□□□□□ -0.83
CAPN1-225ENST00000533704 KCNE1BA0A087WTH5 132 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 IGHV1-45A0A0A0MS14 117 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 IGHV3-20A0A0C4DH32 117 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 BLACEA4D250 179 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 OR2W5A6NFC9 320 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 NCF1BA6NI72 391 aaPredicted RBP9.88□□□□□ -0.83
CAPN1-225ENST00000533704 NCF1CA8MVU1 366 aaPredicted RBP9.88□□□□□ -0.83
CAPN1-225ENST00000533704 CXorf49A8MYA2 514 aaPredicted RBP9.88□□□□□ -0.83
CAPN1-225ENST00000533704 H0YIG0 161 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 WFS1O76024 890 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 SEC24DO94855 1032 aaPredicted RBP9.88□□□□□ -0.83
CAPN1-225ENST00000533704 BMP10O95393 424 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 NSA2O95478 260 aaKnown RBP9.88□□□□□ -0.83
CAPN1-225ENST00000533704 F10P00742 488 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 C8orf89P0DMQ9 161 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 NCF1P14598 390 aaPredicted RBP9.88□□□□□ -0.83
CAPN1-225ENST00000533704 HNF4AP41235 474 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 PLTPP55058 493 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 ETF1P62495 437 aaKnown RBP9.88□□□□□ -0.83
CAPN1-225ENST00000533704 ARG2P78540 354 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 CDC16Q13042 620 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 USP10Q14694 798 aaKnown RBP9.88□□□□□ -0.83
CAPN1-225ENST00000533704 TSNQ15631 228 aaKnown RBP9.88□□□□□ -0.83
CAPN1-225ENST00000533704 EIF2S3LQ2VIR3 472 aaKnown RBP9.88□□□□□ -0.83
CAPN1-225ENST00000533704 TMEM214Q6NUQ4 689 aaKnown RBP9.88□□□□□ -0.83
CAPN1-225ENST00000533704 Q6ZS92 163 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 LANCL3Q6ZV70 420 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 TMPRSS11BQ86T26 416 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 THOC6Q86W42 341 aaKnown RBP9.88□□□□□ -0.83
CAPN1-225ENST00000533704 CEP97Q8IW35 865 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 CTAGE3PQ8IX95 158 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 SPATA6LQ8N4H0 392 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 AMER2Q8N7J2 671 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 ZNF740Q8NDX6 193 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 PRR7Q8TB68 274 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 BRIX1Q8TDN6 353 aaKnown RBP9.88□□□□□ -0.83
CAPN1-225ENST00000533704 PPP4R1Q8TF05 950 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 SLC5A11Q8WWX8 675 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 NEIL2Q969S2 332 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 MOCOSQ96EN8 888 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 PEX11GQ96HA9 241 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 PDLIM5Q96HC4 596 aaKnown RBP9.88□□□□□ -0.83
CAPN1-225ENST00000533704 TGIF2Q9GZN2 237 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 SPNS1Q9H2V7 528 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 CAB39LQ9H9S4 337 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 GPAMQ9HCL2 828 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 PLA2G3Q9NZ20 509 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 CTNNAL1Q9UBT7 734 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 NOVA2Q9UNW9 492 aaKnown RBP9.88□□□□□ -0.83
CAPN1-225ENST00000533704 MTO1Q9Y2Z2 717 aaKnown RBP9.88□□□□□ -0.83
CAPN1-225ENST00000533704 UTP11Q9Y3A2 253 aaKnown RBP9.88□□□□□ -0.83
CAPN1-225ENST00000533704 NAALAD2Q9Y3Q0 740 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 PCDHGA10Q9Y5H3 936 aa9.88□□□□□ -0.83
CAPN1-225ENST00000533704 TRBC2A0A5B9 178 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 PHGDHO43175 533 aaKnown RBP9.87□□□□□ -0.83
CAPN1-225ENST00000533704 CDC123O75794 336 aaPredicted RBP9.87□□□□□ -0.83
CAPN1-225ENST00000533704 WDR47O94967 919 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 B3GALT4O96024 378 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 SERPINA7P05543 415 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 PRR35P0CG20 571 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 EFNA3P52797 238 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 OLR1P78380 273 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 RGS1Q08116 209 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 MFAP5Q13361 173 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 ELOAQ14241 798 aaKnown RBP9.87□□□□□ -0.83
CAPN1-225ENST00000533704 ZNF169Q14929 603 aaPredicted RBP9.87□□□□□ -0.83
CAPN1-225ENST00000533704 PCOLCEQ15113 449 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 RBBP5Q15291 538 aaKnown RBP9.87□□□□□ -0.83
CAPN1-225ENST00000533704 PPP1R3AQ16821 1122 aa9.87□□□□□ -0.83
CAPN1-225ENST00000533704 C18orf21Q32NC0 220 aaPredicted RBP9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms