RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 FDCSPQ8NFU4 85 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 OR9A4Q8NGU2 314 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 AIF1LQ9BQI0 150 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 TMEM79Q9BSE2 394 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 CRB3Q9BUF7 120 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 ALG9Q9H6U8 611 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 CNOT10Q9H9A5 744 aaKnown RBP14.59□□□□□ -0.07
CPSF1-210ENST00000532935 NMRAL1Q9HBL8 299 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 MLXIPLQ9NP71 852 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 MKKSQ9NPJ1 570 aaPredicted RBP14.59□□□□□ -0.07
CPSF1-210ENST00000532935 WWOXQ9NZC7 414 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 RNF112Q9ULX5 631 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 ACOT9Q9Y305 439 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 HS3ST3B1Q9Y662 390 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 TENM4Q6N022 2769 aa14.59□□□□□ -0.07
CPSF1-210ENST00000532935 PRRC2CQ9Y520 2896 aaKnown RBP14.58□□□□□ -0.08
CPSF1-210ENST00000532935 A0A087X1B8 175 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 H0YIG0 161 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 SOCS6O14544 535 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 NDUFS4O43181 175 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 IPO13O94829 963 aaKnown RBP14.58□□□□□ -0.08
CPSF1-210ENST00000532935 NSA2O95478 260 aaKnown RBP14.58□□□□□ -0.08
CPSF1-210ENST00000532935 LTA4HP09960 611 aaKnown RBP14.58□□□□□ -0.08
CPSF1-210ENST00000532935 RHOXF2BP0C7M4 288 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 GNAZP19086 355 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 TFEBP19484 476 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 GGT5P36269 586 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 SCTRP47872 440 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 KCNC1P48547 511 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 CSRP3P50461 194 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 PGDP52209 483 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 CDC16Q13042 620 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 RBBP7Q16576 425 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 SYT16Q17RD7 645 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 PRSS41Q7RTY9 318 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 CCDC91Q7Z6B0 441 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 ISCA2Q86U28 154 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 LAPTM4BQ86VI4 370 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 CLEC1AQ8NC01 280 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 PDPRQ8NCN5 879 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 ZCCHC10Q8TBK6 192 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 STAG3L4Q8TBR4 150 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 SLC44A1Q8WWI5 657 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 EXT2Q93063 718 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 RHOXF2Q9BQY4 288 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 TGIF2Q9GZN2 237 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 SNX15Q9NRS6 342 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 IGSF5Q9NSI5 407 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 C14orf105Q9NVL8 296 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 CD274Q9NZQ7 290 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 C3orf18Q9UK00 162 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 FBXL4Q9UKA2 621 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 NFU1Q9UMS0 254 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 G3BP2Q9UN86 482 aaKnown RBP14.58□□□□□ -0.08
CPSF1-210ENST00000532935 MAP4K5Q9Y4K4 846 aa14.58□□□□□ -0.08
CPSF1-210ENST00000532935 MASP2O00187 686 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 S100BP04271 92 aaPredicted RBP14.57□□□□□ -0.08
CPSF1-210ENST00000532935 SERPIND1P05546 499 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 C2P06681 752 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 INHBAP08476 426 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 IL1RNP18510 177 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 VARSP26640 1264 aaKnown RBP14.57□□□□□ -0.08
CPSF1-210ENST00000532935 AHRP35869 848 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 HSPA7P48741 367 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 SERPINB8P50452 374 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 MAT1AQ00266 395 aaKnown RBP14.57□□□□□ -0.08
CPSF1-210ENST00000532935 IRF9Q00978 393 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 KLRB1Q12918 225 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 PWP1Q13610 501 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 FBXO48Q5FWF7 155 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 KIRREL2Q6UWL6 708 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 ATG14Q6ZNE5 492 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 CENPLQ8N0S6 344 aaPredicted RBP14.57□□□□□ -0.08
CPSF1-210ENST00000532935 LRRN4CLQ8ND94 238 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 NT5CQ8TCD5 201 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 NXNL1Q96CM4 212 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 MOCOSQ96EN8 888 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 NUDT9Q9BW91 350 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 ANKHQ9HCJ1 492 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 DNAJC11Q9NVH1 559 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 GPR83Q9NYM4 423 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 NUDT4Q9NZJ9 180 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 ZFP69BQ9UJL9 534 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 ANAPC2Q9UJX6 822 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 PTBP2Q9UKA9 531 aaKnown RBP14.57□□□□□ -0.08
CPSF1-210ENST00000532935 SLC22A7Q9Y694 548 aa14.57□□□□□ -0.08
CPSF1-210ENST00000532935 A0A087WUV0 522 aaPredicted RBP14.56□□□□□ -0.08
CPSF1-210ENST00000532935 A0A096LPK6 155 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 IDSB3KWA1 339 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 SGK494L7N484 410 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 KERAO60938 352 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 STK16O75716 305 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 ALDOAP04075 364 aaKnown RBP14.56□□□□□ -0.08
CPSF1-210ENST00000532935 TUBBP07437 444 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 C1GALT1C1LP0DN25 315 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 EMP2P54851 167 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 RGS1Q08116 209 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 AIMP2Q13155 320 aaKnown RBP14.56□□□□□ -0.08
CPSF1-210ENST00000532935 RAPSNQ13702 412 aa14.56□□□□□ -0.08
CPSF1-210ENST00000532935 RBBP5Q15291 538 aaKnown RBP14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms